Alternatives and similar repositories for homebrew-science

Users that are interested in homebrew-science are comparing it to the libraries listed below

• brewsci / homebrew-bio
  Bioinformatics formulae for the Homebrew package manager (macOS and Linux)
  ☆316Updated this week
• singularityhub / singularityhub.github.io
  Container tools for scientific computing! Docs at https://singularityhub.github.io/singularityhub-docs
  ☆69Updated 3 years ago
• fxcoudert / gfortran-for-macOS
  GNU Fortran (and GCC) compilers for macOS
  ☆349Updated 9 months ago
• TACC / launcher
  A simple utility for executing multiple sequential or multi-threaded applications in a single multi-node batch job
  ☆63Updated last year
• hpc-carpentry / hpc-python
  HPC Python lesson materials
  ☆61Updated 2 years ago
• jdherman / hpc-submission-scripts
  Example job submission scripts for HPC systems (PBS and SLURM)
  ☆45Updated 8 years ago
• pygridtools / drmaa-python
  Python wrapper around the C DRMAA library.
  ☆108Updated 6 years ago
• brentp / slurmpy
  submit jobs to slurm with quick-and-dirty python
  ☆94Updated 2 years ago
• statgen / SLURM-examples
  ☆92Updated 6 years ago
• singularityhub / singularity-cli
  streamlined singularity python client (spython) for singularity
  ☆59Updated 3 weeks ago
• oicr-gsi / robust-paper
  Ten Simple Rules for Making Research Software More Robust. Manuscript is published at PLoS Computational Biology. Feedback is welcome!
  ☆12Updated 8 years ago
• common-workflow-language / user_guide
  The CWL v1.0 - v1.2 user guide
  ☆43Updated 9 months ago
• NIH-HPC / singularity-def-files
  definition files and wrapper scripts used by NIH HPC staff to install user-facing apps on the Biowulf cluster
  ☆30Updated 4 years ago
• accre / SLURM
  SLURM Example Scripts
  ☆70Updated 5 years ago
• gawbul / docker-sge
  Dockerfile to build a container with SGE installed
  ☆24Updated 9 years ago
• singularityhub / docker2singularity
  A docker image for converting docker images to singularity images.
  ☆296Updated 11 months ago
• troycomi / reportseff
  Tabular seff
  ☆84Updated last month
• pygridtools / gridmap
  Easily map Python functions onto a cluster using a DRMAA-compatible grid engine like Sun Grid Engine (SGE).
  ☆84Updated 2 years ago
• kaczmarj / apptainer-in-docker
  Apptainer in Docker!
  ☆50Updated 7 months ago
• NERSC / slurm-magic
  IPython magic for SLURM.
  ☆69Updated 5 years ago
• singularityhub / github-ci
  An example GitHub Action (CI) to build a Singularity container
  ☆70Updated 2 years ago
• lucapinello / bsub_jupyter
  Connect to a LSF main node directly or trough a ssh jump node, launch a jupyter notebook via bsub and open automatically a tunnel. The n…
  ☆20Updated 3 years ago
• lanl / PyBNF
  An application for parameterization of biological models available in SBML and BNGL formats. Features include parallelization, metaheuris…
  ☆24Updated 2 weeks ago
• singularityhub / singularity-deploy
  Build and deploy Singularity containers to GitHub releases, and pull with the singularity-hpc client
  ☆17Updated last year
• singularityhub / singularity-compose
  orchestration for singularity containers (under development)
  ☆76Updated last year
• davidagraf / doi2bib
  give us a DOI and we'll do our best to get you the BibTeX entry
  ☆118Updated 8 years ago
• vsoch / forward
  Port Forwarding Utility
  ☆52Updated last year
• gmiaslab / mathiomica
  MathIOmica is a Mathematica package for omics data analyses
  ☆12Updated last year
• bbarad / matplotlibrc
  Settings file for matplotlib to maximize figure niceness.
  ☆34Updated 3 years ago
• singularityhub / singularity-hpc
  Local filesystem registry for containers (intended for HPC) using Lmod or Environment Modules. Works for users and admins.
  ☆121Updated last month