Alternatives and similar repositories for dbdataset

Users that are interested in dbdataset are comparing it to the libraries listed below

• ropensci / dbparser
  Source code for the R package, "dbparser" (i.e. DrugBank Parser)
  ☆60Updated 11 months ago
• dhimmel / integrate
  Scripts and resources to create Hetionet v1.0, a heterogeneous network for drug repurposing
  ☆32Updated 7 years ago
• bio2bel / drugbank
  A Bio2BEL package for DrugBank (https://www.drugbank.ca)
  ☆9Updated 4 years ago
• MRCIEU / MELODI-Presto
  A fast and programmatic MELODI
  ☆16Updated last year
• enricoferrero / TargetPred
  In Silico Prediction of Novel Therapeutic Targets Using Gene – Disease Association Data
  ☆18Updated 7 years ago
• AstraZeneca / skywalkR-graph-features
  Example notebooks that illustrate how to generate knowledge-based features. Features can be used in a variety of ML models, including rec…
  ☆11Updated 3 years ago
• opentargets-archive / data_pipeline
  Code for the data processing pipeline
  ☆17Updated 4 years ago
• emreg00 / proximity
  Drug-disease proximity based therapeutic effect screening and analysis
  ☆19Updated 7 years ago
• adam-sam-brown / repoDB
  A Standard Database for Drug Repositioning
  ☆19Updated 7 years ago
• christopherBelter / textmining
  Sample code and explanations for doing basic text mining tasks in R
  ☆21Updated 4 years ago
• biocypher / clinical-knowledge-graph
  ☆18Updated last year
• GuiltyTargets / guiltytargets
  Target prioritization using network representation learning
  ☆11Updated 3 years ago
• biopragmatics / bioversions
  🪝 What's the latest version for each database?
  ☆27Updated this week
• RomanoLab / comptox_ai
  ComptoxAI - An artificial Intelligence toolkit for computational toxicology
  ☆17Updated 2 months ago
• rfhb / ctrdata
  Aggregate and analyse clinical trials data from public registers
  ☆49Updated last week
• NeilPearson-Lilly / TractaViewer
  ☆11Updated 5 years ago
• bio2bel / bio2bel
  A Python framework for integrating biological databases and structured data sources in Biological Expression Language (BEL)
  ☆21Updated 3 years ago
• biothings / mychem.info
  MyChem.info: A BioThings API for chemical/drug annotations
  ☆16Updated 2 months ago
• ckoenigs / PharMeBINet
  Build PharMeBINet from different sources.
  ☆17Updated 3 months ago
• krishnanlab / txt2onto
  Code for classifying unstructured text to tissue ontology terms using natural language processing and machine learning.
  ☆24Updated 10 months ago
• EHDEN / ETL-UK-Biobank
  ETL UK-Biobank
  ☆14Updated 2 years ago
• bips-hb / pvm
  A collection of signal detection methods used in the field of pharmacovigilance
  ☆27Updated 4 months ago
• SuLab / DrugMechDB
  A database of paths that represent the mechanism of action from a drug to a disease in an indication.
  ☆64Updated last month
• monarch-initiative / monarchr
  R package for easy access, manipulation, and analysis of the Monarch Initiative or other KGX-formatted knowledge graphs.
  ☆14Updated 3 weeks ago
• b2slab / FELLA
  FELLA: an R package for Metabolomics data enrichment through diffusion
  ☆22Updated 4 years ago
• dhimmel / clintrials
  Cataloging pharmacotherapies in clinical trial from ClinicalTrials.gov
  ☆27Updated 9 years ago
• auerbachs / BMDExpress-2
  Software for analyzing high dimensional dose-response data
  ☆19Updated 10 months ago
• AnacletoLAB / RNA-KG
  ☆23Updated 7 months ago
• BaderLab / netDx
  R package with netDx software and data for examples
  ☆12Updated 2 years ago
• BenGlicksberg / PatientExploreR
  Dynamic visualization of Electronic Health Record data in the OMOP framework
  ☆28Updated 4 years ago