Alternatives and similar repositories for volumina

Users that are interested in volumina are comparing it to the libraries listed below

• SynapseWeb / Reconstruct
  Source code for Reconstruct
  ☆7Updated 6 years ago
• AdaptiveParticles / LibAPR
  Library for producing and processing on the Adaptive Particle Representation (APR).
  ☆48Updated 2 months ago
• ilastik / ilastik-0.5
  Interactive Learning and Segmentation Toolkit
  ☆23Updated 12 years ago
• bobpepin / YacuDecu
  GPU Deconvolution Library with C and Matlab API for nVidia GPUs
  ☆21Updated 6 years ago
• abria / TeraStitcher
  A tool for fast automatic 3D-stitching of teravoxel-sized microscopy images
  ☆84Updated last year
• constantinpape / cluster_tools
  Distributed segmentation for bio-image-analysis
  ☆38Updated 3 weeks ago
• delunapaolo / calipy
  Real-time, interactive exploration of 3D image stacks
  ☆13Updated 5 years ago
• PreibischLab / multiview-reconstruction
  Software for the reconstruction of multi-view microscopic acquisitions like Selective Plane Illumination Microscopy (SPIM) Data
  ☆26Updated last week
• ClearVolume / PyClearVolume
  python bindings to the ClearVolume project that enables serving numpy data from within python to the renderer.
  ☆15Updated 8 years ago
• jni / ray
  Automatic segmentation of electron microscopy volumes
  ☆31Updated 12 years ago
• SCIInstitute / fluorender
  FluoRender is an interactive tool for confocal microscopy data analysis.
  ☆45Updated this week
• billkarsh / Alignment_Projects
  Aligner for large scale serial section image data
  ☆16Updated last year
• scopetools / cudadecon
  GPU accelerated 3D image deconvolution using CUDA
  ☆35Updated 10 months ago
• DerThorsten / nifty
  A nifty library for graph based image segmentation.
  ☆45Updated last month
• seung-lab / neuroglancer
  WebGL-based viewer for volumetric data
  ☆23Updated last week
• brouhardlab / Kappa
  A Fiji plugin for Curvature Analysis.
  ☆13Updated 4 years ago
• funkey / nyroglancer
  jupyter notebook extension to visualize numpy arrays with the neuroglancer
  ☆27Updated 6 years ago
• knossos-project / knossos
  KNOSSOS is a software tool for the visualization and annotation of 3D image data and was developed for the rapid reconstruction of neural…
  ☆74Updated 2 weeks ago
• mkazhdan / DMG
  Distributed Gradient-Domain Processing of Planar and Spherical Images
  ☆26Updated 4 years ago
• funkelab / gunpowder
  A library to facilitate machine learning on multi-dimensional images.
  ☆82Updated this week
• bene51 / gpu_deconvolution
  C and NVidia CUDA code for multi-view deconvolution
  ☆11Updated 8 years ago
• adwanner / PyKNOSSOS
  PyKNOSSOS is a software tool for the visualization and annotation of 3D image data and was developed for high-throughput image annotation…
  ☆18Updated 5 years ago
• clEsperanto / clij-opencl-kernels
  ☆17Updated 2 months ago
• nicolasBeucher / mamba-image
  MAMBA is a mathematical morphology library
  ☆36Updated 7 years ago
• janelia-flyem / gala
  Automatic segmentation of electron microscopy volumes
  ☆77Updated 4 years ago
• seung-lab / zmesh
  Marching Cubes & Mesh Simplification on multi-label 3D images.
  ☆62Updated 3 months ago
• maweigert / gputools
  GPU accelerated image/volume processing in Python
  ☆111Updated last month
• VCG / compresso
  Compresso: Efficient Compression of Segmentation Data For Connectomics
  ☆12Updated 3 years ago
• computational-imaging / ThreeDeconv.jl
  A convex 3D deconvolution algorithm for low photon count fluorescence imaging
  ☆31Updated 3 years ago
• pearu / iocbio
  Automatically exported from code.google.com/p/iocbio
  ☆16Updated 9 years ago