☆15Mar 23, 2026Updated 4 months ago
Alternatives and similar repositories for PhytoPipe
Users that are interested in PhytoPipe are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆12Jan 25, 2023Updated 3 years ago
- Analyzing plant disease epidemics☆17Jun 18, 2024Updated 2 years ago
- Tool to submit viral sequences to Genbank.☆16May 14, 2026Updated 2 months ago
- Source code and Solutions for HarvardX CS50's 2023-2024; Includes all the PSets and Project work for CS50x, CS50W (web), CS50P (python)☆23Feb 8, 2024Updated 2 years ago
- Biological sequence visualization functions in R☆13May 28, 2026Updated 2 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Automatic Assembly For The Fungi☆27Updated this week
- Fast viral consensus genome reconstruction☆27Jun 19, 2026Updated last month
- GenGIS (pronounced 'Genghis' like Genghis Khan) is a bioinformatics application that allows users to combine digital map data with inform…☆29Nov 9, 2017Updated 8 years ago
- Phylogenetic model exploration with deep learning☆12Jun 15, 2026Updated last month
- A Toolbox for Manipulating Biological Sequences in R☆26Sep 30, 2025Updated 10 months ago
- Cancer Genome Project Insertion/Deletion detection pipeline based around Pindel☆28May 14, 2025Updated last year
- Documentation for analyzing SARS-Cov2 samples.☆12Jun 4, 2020Updated 6 years ago
- Plant Disease Epidemiology in R☆31Jul 9, 2026Updated last month
- A richly featured desktop platform for data analysis of bioinformatics. Especially, for quick sequence annotation and mutation analysis o…☆34Nov 6, 2024Updated last year
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- ☆11Aug 18, 2024Updated last year
- VarSkip multiplex PCR designs for SARS-CoV-2 sequencing☆15Jun 14, 2022Updated 4 years ago
- PoSeiDon: positive selection detection and recombination analysis pipeline☆40Sep 22, 2025Updated 10 months ago
- SARs-CoV-2 Primer schemes☆16May 14, 2025Updated last year
- Automated processing of Sanger sequencing data, taxonomic profiling, and generation of microbial strain libraries☆18Jan 4, 2026Updated 7 months ago
- SARS-CoV-2 genomics☆16Jun 20, 2025Updated last year
- MYB transcription factors are one of the largest gene family in plants and control many processes. This repository provides additional ba…☆12Feb 26, 2026Updated 5 months ago
- This repository is a cloud storage of my new research ideas and interests in Bioinformatics and Computational Biology. Github is a good w…☆17May 30, 2017Updated 9 years ago
- This is a python implementation of "Distributed k-Means and k-Median Clustering on General Topologies" by Maria Florina Balcan et al. (ht…☆14Jun 10, 2018Updated 8 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Ultra-rapid detection of viral variants directly from sequencing data☆47Jul 30, 2026Updated last week
- show the context position in your code with indents☆13Sep 28, 2015Updated 10 years ago
- Open-source implementation of the CUDA API.☆13May 5, 2012Updated 14 years ago
- We built a large lung CT scan dataset for COVID-19 by curating data from 7 different public datasets. These datasets have been publicly u…☆11Jun 9, 2021Updated 5 years ago
- ☆16Apr 21, 2022Updated 4 years ago
- BEAST 2 package which provides support for multi-type trees: phylogenetic trees on structured populations.☆22Aug 11, 2025Updated 11 months ago
- a personal web server, one line of config to add a reverse proxy☆19Apr 13, 2026Updated 3 months ago
- A filter algorithm with program to filter an alignment or mapping file☆12May 15, 2025Updated last year
- TADA - Targeted Amplicon Diversity Analysis - a DADA2-focused Nextflow workflow for any targeted amplicon region☆22May 9, 2026Updated 3 months ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- fastHaN is a fast and scalable program for constructing haplotype networks for large samples☆21Feb 14, 2024Updated 2 years ago
- An example of setting up private Ethereum blockchain using docker swarms and AWS☆17Jul 2, 2018Updated 8 years ago
- HiFi-SR is a Python-based pipeline for the detection of plant mitochondrial structural rearrangements based on the mapping of PacBio high…☆11Jun 26, 2026Updated last month
- PhyloForge: Unifying micro and macro evolution with comprehensive genomic signals☆10May 17, 2024Updated 2 years ago
- ☆13Feb 16, 2022Updated 4 years ago
- A streamlined workflow and GUI for real-time species identification and pathogen characterization via nanopore sequencing data. Engineere…☆20Aug 3, 2026Updated last week
- Pipeline for genome scaffolding by modelling distributions of HiC pairs☆12Dec 7, 2022Updated 3 years ago