[Pentest] miRanda: An miRNA target scanner that aims to predict mRNA targets for microRNAs using dynamic-programming alignment and thermodynamics
☆12Dec 30, 2022Updated 3 years ago
Alternatives and similar repositories for miranda
Users that are interested in miranda are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- TSSr is an R/Bioconductor package for comprehensive analyses of transcription start site (TSS) data☆11Sep 21, 2026Updated last month
- MCP server for life-science knowledge graphs☆21Updated this week
- icSHAPE pipeline☆32Oct 1, 2015Updated 11 years ago
- Generation of sequence-level annotations for amino acid sequences☆16Oct 26, 2026Updated last week
- Ultra-fast 5' and 3' demultiplexer☆31Apr 23, 2024Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Code for "High-throughput and high-sensitivity full-length single-cell RNA-seq analysis on third-generation sequencing platform" paper. P…☆10Jun 21, 2024Updated 2 years ago
- Efficient target prediction incorporating accessibility of interaction sites☆60Updated this week
- Pipeline for MAS-Seq processing☆10Updated this week
- SKERA - Deconcat PacBio reads☆10Oct 19, 2026Updated 2 weeks ago
- Blastocyst-like structures generated from human pluripotent stem cells☆13Sep 25, 2022Updated 4 years ago
- SkewC a novel quality-assessment method to identify poor quality single-cells in scRNA-seq experiments. The method relies on the measure …☆11Aug 2, 2023Updated 3 years ago
- An automatic web tool for phylogenetic inference of animal/palnt orthogroups under purposeful taxonomic sampling☆10Oct 21, 2026Updated 2 weeks ago
- AIMS - Automated Immune Molecule Separator: An analysis pipeline for distinguishing distinct subsets of Ig and MHC molecules. See below s…☆11Sep 21, 2026Updated last month
- Pipeline for analysing intergenic regions in bacteria☆39Oct 25, 2019Updated 7 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- ☆10Mar 8, 2024Updated 2 years ago
- lncHOME (lncRNA Homology Explorer), a computational pipeline that identifies a unique coPARSE-lncRNA class with conserved genomic locatio…☆12Nov 2, 2023Updated 3 years ago
- Transposable element expression at unique loci in single cells with CELLO-seq☆12Jun 17, 2024Updated 2 years ago
- 10x single cell short- and long-read RNA sequencing☆12Jan 17, 2024Updated 2 years ago
- lncRNA-Py is a development package for applying machine learning and deep learning to the problem of lncRNA classification, i.e. predicti…☆12Jan 24, 2025Updated last year
- A tool to use stereo-seq GEM and ssDNA to generate single-cell and 3D spatial resolved transtriptomics data☆14Oct 12, 2023Updated 3 years ago
- Data Analysis For FLAM-Seq Third Generation RNA Sequencing☆10Jan 22, 2022Updated 4 years ago
- (GPU accelerated) Multi-arch (linux/amd64, linux/arm64/v8) JupyterLab Julia docker images. Please submit Pull Requests to the GitLab repo…☆15Updated this week
- Reusable tools for working with next-generation sequencing (NGS) data☆12Oct 7, 2024Updated 2 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Minimal scripts to reproduce the RADICL-seq analysis of the Nature Communications manuscript☆11Jan 30, 2020Updated 6 years ago
- RNA Secondary Structure Prediction☆11Oct 26, 2023Updated 3 years ago
- The web application for the crowdsourced gene expression signatures: http://amp.pharm.mssm.edu/creeds/☆11Jul 6, 2023Updated 3 years ago
- MaxQuant and Perseus Bug Reporting☆10Mar 19, 2025Updated last year
- Source of Coursera online projects☆22May 2, 2016Updated 10 years ago
- Enhancing Gene Set Overrepresentation Analysis with Large Language Models☆11Mar 17, 2025Updated last year
- Visium HD segmented cell-level workflow demonstration☆10Jan 22, 2026Updated 9 months ago
- ☆10Nov 6, 2023Updated 3 years ago
- R package to calculate the Aneuploidy Score from Chromosome Arm-level SCNAs/Aneuploidies (CAAs) as outlined and expanded by Shukla et al.…☆17Feb 17, 2021Updated 5 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- 在R语言中使用ChatGPT(中国大陆版)☆11Mar 17, 2023Updated 3 years ago
- ☆12Jul 15, 2026Updated 3 months ago
- The official IFC Loader for Three.js.☆10Oct 31, 2021Updated 5 years ago
- ☆14Apr 29, 2024Updated 2 years ago
- Nascent Transcription Processing Pipeline☆12Apr 6, 2026Updated 7 months ago
- Codes to regenerate figures for mutagen paper☆12Apr 8, 2021Updated 5 years ago
- ☆16Apr 4, 2023Updated 3 years ago