我在学术科研工作中的一些思路和方法，以 Agent Skill 形式沉淀下来和你分享。by 熊言熊语
☆71Jun 13, 2026Updated 2 months ago
Alternatives and similar repositories for bear-research-skills
Users that are interested in bear-research-skills are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Lightweight, self-hosted PDF paper manager with figure extraction, grouping, and tagging. Built with Go + SQLite☆42Aug 19, 2026Updated last week
- A cross-platform terminal workspace for remote development and AI agent workflows, powered by libghostty-vt☆384Aug 17, 2026Updated last week
- Open-source, local-first desktop AI research workbench for scientific computing with Python/R, MCP bioinformatics tools, SSH/WSL/GPU runt…☆1,041Updated this week
- one agent or one fleet☆18May 11, 2026Updated 3 months ago
- ☆13Mar 13, 2026Updated 5 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A Snakemake-based pipeline for gene mapping in Triticeae.☆11Mar 5, 2022Updated 4 years ago
- scAgent: No-code single-cell analysis for every biologist☆16Mar 24, 2026Updated 5 months ago
- 🏅 Open-source cognitive frameworks of Nobel Medicine laureates (2004-2025), distilled into runnable thinking tools☆22Apr 6, 2026Updated 4 months ago
- 基于rstudio、code-server、jupyter-lab的dockerfile，用于快速搭建数据分析环境。☆57Nov 14, 2022Updated 3 years ago
- A filter algorithm with program to filter an alignment or mapping file☆12May 15, 2025Updated last year
- Code used in article "Uncovering the transcriptional regulatory network involved in boosting wheat regeneration and transformation".☆13Mar 21, 2023Updated 3 years ago
- ☆63Mar 14, 2024Updated 2 years ago
- A python library for multi omics included bulk, single cell and spatial RNA-seq analysis.☆1,189Updated this week
- Biomni-Web: A General-Purpose Biomedical AI Agent with Custom UI☆41Feb 22, 2026Updated 6 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Some NGS workflow created by snakemake☆14Jun 30, 2026Updated last month
- ☆11Nov 30, 2024Updated last year
- Defined MRM transitions from untargeted metabolomics data☆11Nov 13, 2023Updated 2 years ago
- 生物信息学之神.skill — 综合50位顶级学者的集体智慧操作系统 | God of Bioinformatics: Collective cognitive OS from 50 top scholars☆19Apr 11, 2026Updated 4 months ago
- DeepMASS2 is a cross-platform GUI software tool, which enables deep-learning based metabolite annotation via semantic similarity analysis…☆15Jan 22, 2026Updated 7 months ago
- ChIP-seq analysis notes from Tommy Tang☆19Jun 28, 2016Updated 10 years ago
- Free-access R books for beginners. Welcome to Fork it. Commercial use is forbidden!☆14Sep 16, 2018Updated 7 years ago
- Converting LC−MS-based Untargeted Metabolomics Data into Image towards Clinical Diagnosis☆12Apr 13, 2023Updated 3 years ago
- A web app that uses machine learning to recommend the most suitable journals based on the text content of your preprint☆22May 23, 2023Updated 3 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- USEARCH中文帮助文档(USEARCH Chinese manual)☆23Aug 1, 2024Updated 2 years ago
- bash script to search for centromeric repeat patterns in PacBio data, using several current tools (trf and R)☆13Dec 1, 2016Updated 9 years ago
- Benchmarking computational doublet-detection methods for single-cell RNA sequencing data☆10Feb 25, 2021Updated 5 years ago
- Two or three subtypes of high grade serous ovarian cancer subtypes fit data from different populations better than four☆12Oct 10, 2018Updated 7 years ago
- MethGo: a comprehensive tool for analyzing whole-genome bisulfite sequencing data☆24Apr 24, 2017Updated 9 years ago
- CANOPUS visualization for Jupyter notebook☆20Mar 9, 2022Updated 4 years ago
- The TEA-GCN pipeline to construct gene co-functional and co-regulatory networks from public transcriptomes using condition-specific ensem…☆20May 11, 2026Updated 3 months ago
- ☆16Apr 3, 2023Updated 3 years ago
- Portable command-line tool to query bioinformatics APIs, data, databases and files.☆93Feb 23, 2023Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- SEASTAR - Systematic Evaluation of Alternative transcription STArt site in RNA☆14Jan 21, 2018Updated 8 years ago
- Genomic related tools☆76Nov 13, 2021Updated 4 years ago
- PhaseGrass, a reference-based phasing workflow generating chromosome-level haplotype-resolved diploid assembly for highly heterozygous ge…☆17Jun 2, 2026Updated 2 months ago
- Single cell epigenomic clustering based on accessibility pattern☆24Nov 9, 2022Updated 3 years ago
- Simple tools for working with Hi-C data☆20Dec 19, 2018Updated 7 years ago
- Molecular Signatures Database (MSigDB) in a data frame☆16Dec 3, 2018Updated 7 years ago
- R implementation of the BAGEL method to call for gene essentiality significance☆11May 1, 2018Updated 8 years ago