dattalab / d_code
2Photon Imaging and Electrophysiology Analysis code for the Datta Lab @ HMS
☆14Updated 9 years ago
Alternatives and similar repositories for d_code:
Users that are interested in d_code are comparing it to the libraries listed below
- Blazing fast calcium imaging analysis toolbox☆22Updated 7 years ago
- Single photon tools for Neuroscience☆35Updated last year
- Region Of Interest Classification and Tracking☆18Updated last week
- a Python machine learning library for neurophysiology data☆36Updated 6 years ago
- Deconvolution of calcium imaging data☆93Updated 3 months ago
- Python package for analysis of dynamic fluorescence microscopy data☆100Updated 6 years ago
- Janelia Animal Behavior Detector☆80Updated 3 weeks ago
- Match suite2p ROIs between imaging sessions☆25Updated 6 years ago
- Image processing and tools for widefield imaging☆18Updated 5 years ago
- ☆36Updated 3 years ago
- Generate a matrix of predictors corresponding to different behavioral variables and process a regression-based encoding model to obtain t…☆18Updated 5 years ago
- Computational toolbox for analysis of calcium imaging data of neuronal populations☆32Updated last year
- spike extraction from calcium signals (Deneux et al., 2016)☆29Updated 5 years ago
- Functions to assess quality of spike sorting results☆32Updated last year
- miniscope analysis pipeline with interactive visualizations☆93Updated 9 months ago
- Spike sorting software being developed at Flatiron Institute, based on JRCLUST (Janelia Rocket Cluster)☆28Updated 2 years ago
- Pytorch implementation of LocaNMF☆35Updated 5 years ago
- Jax implementation of normcorre☆10Updated 3 months ago
- Keras network for spike detection from calcium traces☆12Updated 4 years ago
- A toolbox for inferring spikes from calcium traces.☆23Updated last year
- Python tools for analysis of neurophysiology data☆37Updated last year
- offline/online spike sorting. Un logiciel de gauche qui ne fait pas d'amalgame entre la classe et la coquetterie.☆54Updated last year
- Python implementation of fast-oopsi, smc-oopsi, wiener, and discretize with binning☆14Updated 2 years ago
- A program for viewing and analyzing electrophysiological data☆56Updated 3 weeks ago
- WIP: Python port of Kilosort2☆51Updated last year
- Revealing neural correlates of behavior without behavioral measurements☆14Updated 5 years ago
- IBL core shared libraries☆63Updated last week
- Neuroelectrophysiology object model and data analysis in Python.☆51Updated last month
- ☆26Updated last year
- The code takes as an input a time series vector of calcium observationsand produces samples from the posterior distribution of the underl…☆20Updated 8 years ago