Alternatives and similar repositories for tumor_regions_segmentation

Users that are interested in tumor_regions_segmentation are comparing it to the libraries listed below

• Biooptics2021 / PathFinder
  ☆54Updated 2 years ago
• wenqi006 / SlideGraph
  ☆56Updated 3 years ago
• PathologyDataScience / MuTILs_Panoptic
  Amgad M, Salgado R, Cooper LA. A panoptic segmentation approach for tumor-infiltrating lymphocyte assessment: development of the MuTILs m…
  ☆24Updated last week
• peng-lab / HistoBistro
  Weakly-supervised learning pipeline for histopathology images. Publications: Biomarker prediction in colorectal cancer (CRC)
  ☆81Updated last year
• PathologyDataScience / HiPS
  Histomic Prognostic Signature (HiPS): A population-level computational histologic signature for invasive breast cancer prognosis
  ☆32Updated last year
• PathologyDataScience / NuCLS
  NuCLS: A scalable crowdsourcing, deep learning approach and dataset for nucleus classification, localization and segmentation
  ☆54Updated 3 years ago
• mahmoodlab / Patch-GCN
  Context-Aware Survival Prediction using Patch-based Graph Convolutional Networks - MICCAI 2021
  ☆154Updated last year
• simongraham / hovernet_inference
  HoVer-Net inference code for simultaneous nuclear segmentation and classification
  ☆68Updated 2 years ago
• MHMAILab / auto_lymph
  Predicting gastric cancer outcome from resected lymph node histopathology images using deep learning
  ☆36Updated 4 years ago
• hms-dbmi / MOMA
  MOMA
  ☆54Updated last year
• TissueImageAnalytics / cerberus
  One Model is All You Need: Multi-Task Learning Enables Simultaneous Histology Image Segmentation and Classification
  ☆93Updated 9 months ago
• wangxiaodong1021 / HCC_Prognostic
  Exploring prognostic indicators in pathological images of hepatocellular carcinoma based on deep learning
  ☆44Updated 4 years ago
• taliq / TEA-graph
  First commit
  ☆62Updated 3 years ago
• smujiang / WSITools
  Tools for whole slide image (WSI) processing. Especially for (pairwise) patch extraction, annotation parsing and data preparation for dee…
  ☆56Updated 8 months ago
• DIAGNijmegen / pathology-hooknet
  ☆63Updated 11 months ago
• smujiang / Re-stained_WSIs_Registration
  Re-stained whole slide image alignment
  ☆35Updated last year
• AIRMEC / HECTOR
  Multimodal deep learning to predict distant recurrence-free probability from digitized H&E tumour slide and tumour stage.
  ☆42Updated 8 months ago
• AI4SCR / VirtualMultiplexer
  A generative toolkit to translate H&E images to multiplexed IHC
  ☆50Updated 8 months ago
• histocartography / hact-net
  ☆71Updated 4 years ago
• AGFoersch / MultiStainDeepLearning
  Code from Foersch et al. (Under Construction / Development)
  ☆37Updated 2 years ago
• Cassie07 / PathOmics
  [MICCAI 2023 Oral] The official code of "Pathology-and-genomics Multimodal Transformer for Survival Outcome Prediction" (top 9%)
  ☆99Updated 5 months ago
• hrlblab / CS-MIL
  ☆54Updated 4 months ago
• KatherLab / marugoto
  Tools to build deep learning pipelines.
  ☆109Updated 9 months ago
• KatherLab / end2end-WSI-preprocessing
  End-to-end pipeline to go from raw H&E slides to normalised extracted features for training
  ☆27Updated last year
• DIAGNijmegen / pathology-whole-slide-data
  A package for working with whole-slide data including a fast batch iterator that can be used to train deep learning models.
  ☆105Updated 9 months ago
• vkola-lab / tmi2022
  A graph-transformer for whole slide image classification
  ☆170Updated last year
• MWod / DeeperHistReg
  DeeperHistReg - Source Code
  ☆69Updated last year
• TissueImageAnalytics / CoNIC
  CoNIC Challenge
  ☆67Updated last year
• KatherLab / HIA
  Histopathology Image Analysis
  ☆92Updated 2 years ago
• mahmoodlab / PORPOISE
  Pan-Cancer Integrative Histology-Genomic Analysis via Multimodal Deep Learning - Cancer Cell
  ☆224Updated 2 years ago