Codex-native self-improving memory loop with durable memories, nightly refinement, and deterministic maintenance scripts.
☆14May 1, 2026Updated 4 months ago
Alternatives and similar repositories for self-improving-for-codex
Users that are interested in self-improving-for-codex are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Graphical Representation of Ancestral Sequence Predictions☆15Mar 6, 2023Updated 3 years ago
- ☆11Apr 20, 2018Updated 8 years ago
- Predict prokaryotic hosts for phage (meta) genomic sequences☆11Apr 4, 2022Updated 4 years ago
- ☆14Oct 23, 2024Updated last year
- Module and script to remove contamination in assembled genomes before submission to ncbi☆14Jul 28, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆14Mar 16, 2024Updated 2 years ago
- This is the codebase for Faucet, described in our manuscript: https://academic.oup.com/bioinformatics/article/34/1/147/4004871, by Roye R…☆18May 21, 2017Updated 9 years ago
- Scripts, HMMs and search databases for identifying and classifying viral RdRp sequences☆16Aug 6, 2026Updated last month
- Homebrew tap for formulae to build ARB (http://www.arb-home.de) and related software.☆14Jul 1, 2026Updated 2 months ago
- This is a deep learning method for identification of viral contigs with short length from metagenomic data.☆10Dec 20, 2021Updated 4 years ago
- ☆16Oct 7, 2025Updated 11 months ago
- Perl and Python scripts allowing to get sequence information from GenBank, RefSeq or ENA sequence repositories☆14Mar 29, 2025Updated last year
- Scanning and visualization for variable gap motifs.☆19Aug 6, 2024Updated 2 years ago
- RNA dependent RNA Polymerase Palmprint Analysis☆13Aug 1, 2024Updated 2 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Plot stacked logos for single or multiple DNA, RNA and amino acid sequence☆17Apr 29, 2026Updated 4 months ago
- POC Nextflow pipeline to run the Chai-1, SOTA model for biomolecular structure prediction☆11Jul 21, 2026Updated last month
- Find hot data sets in your area (of research)!☆16Dec 20, 2018Updated 7 years ago
- ☆14Oct 29, 2024Updated last year
- Pathogenfinder2☆19Apr 20, 2026Updated 5 months ago
- repo for cicese metatranscriptomics workshop, nov 2018☆14Jan 22, 2020Updated 6 years ago
- Efficient retrieval, download, and unification of genomic data from leading biodiversity databases☆18Updated this week
- Collection of galaxy tools developed by the artbio-platform at the IBPS (Institut de Biologie Paris-Seine)☆13Updated this week
- PhyloAln: a convenient reference-based tool to align sequences and high-throughput reads for phylogeny and evolution in the omic era☆19Apr 16, 2026Updated 5 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- A scalable framework for automatically indexing microbial genomes and accurately characterizing metagenome-assembled genomes with Sequenc…☆24Aug 13, 2026Updated last month
- CIFcurator helps create a curated ensemble of molecular structures☆19Updated this week
- This is graphanalyzer.py, a script designed to automatically interpret the outputs generated by vConTACT2 when using the INPHARED databas…☆18Nov 29, 2023Updated 2 years ago
- Prokaryotic virus Host Predictor (PHP) is a computational tool for host prediction of prokaryotic viruses based on Gaussian Model (GM). P…☆12Jan 8, 2021Updated 5 years ago
- ☆16May 26, 2022Updated 4 years ago
- ☆19Dec 6, 2022Updated 3 years ago
- Fast, accurate construction of multiple sequence alignments from protein language embeddings☆19Jul 22, 2026Updated last month
- A machine learning approach to alignment filtering☆16Jun 18, 2026Updated 3 months ago
- Munge GenBank files into FASTA and tab-separated metadata☆15Feb 5, 2026Updated 7 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- ☆20May 13, 2021Updated 5 years ago
- Phylogenetic Network Inference without ILS☆19Jul 31, 2022Updated 4 years ago
- ☆22Dec 9, 2023Updated 2 years ago
- Code and data used in Mollentze et al. (2021) "Identifying and prioritizing potential human-infecting viruses from their genome sequences…☆19Apr 15, 2026Updated 5 months ago
- Virus reassortment inference software. Infers both recent and ancestral reassortment and uses flexible molecular clock constraints.☆23Sep 29, 2025Updated 11 months ago
- LorMe package for R:Lightening One-code Resolving Microbial Ecology Program☆19Jul 20, 2026Updated 2 months ago
- circularMT creates pictures of the genomic arrangement of mitochondrial genomes☆18Jul 15, 2026Updated 2 months ago