Alternatives and similar repositories for spm_auto_reorient:

Users that are interested in spm_auto_reorient are comparing it to the libraries listed below

• MASILab / Synb0-DISCO
  Distortion correction of diffusion weighted MRI without reverse phase-encoding scans or field-maps
  ☆69Updated 9 months ago
• kbxu / brant
  BRAinNetome fMRI Toolkit -- MATLAB scripts/GUIs for fMRI data pre-/post-processes
  ☆15Updated 4 years ago
• neurolabusc / nii_preprocess
  nii_preprocess adapted for LARC and ABC studies at UofSC
  ☆22Updated 3 years ago
• wwu-mmll / deepbet
  Fast brain extraction using neural networks
  ☆32Updated 9 months ago
• pnlbwh / dMRIharmonization
  Multi-site dMRI harmonization
  ☆47Updated last week
• sameerd / DiffusionTensorImaging
  Single Shell Free Water Elimination Model for Diffusion Tensor Imaging
  ☆24Updated last year
• npnl / PALS
  Pipeline for Analysing Lesions after Stroke (PALS) is a scalable and user-friendly toolbox designed to facilitate standardised analysis a…
  ☆23Updated 3 weeks ago
• mezera / mrQ
  mrQ_BoxJoinBox
  ☆22Updated last year
• nipreps / sdcflows
  Susceptibility Distortion Correction (SDC) workflows for EPI MR schemes
  ☆35Updated 3 weeks ago
• neurolabusc / NiiStat
  NiiStat is a set of Matlab scripts for analyzing neuroimaging data from clinical populations
  ☆31Updated 4 years ago
• MASILab / PreQual
  An automated pipeline for integrated preprocessing and quality assurance of diffusion weighted MRI images
  ☆50Updated 8 months ago
• hMRI-group / hMRI-toolbox
  A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)
  ☆69Updated this week
• ExploreASL / ExploreASL
  ExploreASL: releases can be found in the main branch or within the releases tab. If you want to contribute, please contact us at h.j.muts…
  ☆53Updated 2 weeks ago
• Deep-MI / fsqc
  A set of quality control scripts for FreeSurfer- and FastSurfer-processed structural MRI data
  ☆63Updated 5 months ago
• CoBrALab / optimized_antsMultivariateTemplateConstruction
  A re-implementation of antsMultivariateTemplateConstruction2.sh using optimized image pyramid scale-space and qbatch support
  ☆25Updated last month
• andrewjahn / MRtrix_Analysis_Scripts
  Scripts for analyzing diffusion data with MRtrix
  ☆16Updated 3 years ago
• NYU-DiffusionMRI / SMI
  Toolbox for parameter estimation of the Standard Model of diffusion in white matter
  ☆24Updated last month
• PennLINC / aslprep
  Preprocessing of arterial spin labeling (ASL) data
  ☆48Updated this week
• gbarisano / alps
  Bash script to compute DTI-ALPS
  ☆49Updated 2 months ago
• HumanBrainED / NHP-BrainExtraction
  ☆35Updated 3 years ago
• mvgolub / FW-DTI-Beltrami
  ☆11Updated 2 years ago
• RafaelNH / Free-water-elimination-DTI
  Reproduce the artice Hoy et al. 2014 Optimization of a free water elimination two-compartment model for diffusion tensor imaging. Neuroim…
  ☆13Updated 6 years ago
• NYU-DiffusionMRI / DESIGNER-v1
  Diffusion parameter EStImation with Gibbs and NoisE Removal pipeline
  ☆51Updated last year
• vzachari / IronSmithQSM
  Ironsmith is a comprehensive, fully automated pipeline for creating and processing Quantitative Susceptibility Maps (QSM), extracting QSM…
  ☆23Updated last year
• CoBrALab / RABIES
  fMRI preprocessing pipeline and analysis tools adapted for rodent images. Visit the full documentation at https://rabies.readthedocs.io/
  ☆41Updated last week
• srikash / presurfer
  Scripts to prepare MP2RAGE for Freesurfer
  ☆26Updated last year
• dmritrekker / trekker
  dMRI based fiber tracking using parallel transport tractography
  ☆26Updated last month
• QMICodeBase / TORTOISEV4
  Official TORTOISE Diffusion MRI Processing Pipeline V4 Source Code and Documentation
  ☆25Updated 3 weeks ago
• miac-research / psmd
  Peak width of Skeletonized Mean Diffusivity (PSMD)
  ☆11Updated 4 months ago
• cookpa / antsInstallExample
  Simple bash script that downloads and installs ANTs in a unix environment
  ☆13Updated 2 months ago