Alternatives and similar repositories for ezbids

Users that are interested in ezbids are comparing it to the libraries listed below

• Qoala-T / QC
  Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data
  ☆78Updated 4 years ago
• raamana / visualqc
  VisualQC : assistive tool to ease the quality control workflow of neuroimaging data.
  ☆74Updated 5 months ago
• bids-apps / freesurfer
  BIDS app wrapping recon-all from FreeSurfer
  ☆43Updated 2 months ago
• HALFpipe / HALFpipe
  ENIGMA HALFpipe is a user-friendly software that facilitates reproducible analysis of fMRI data
  ☆105Updated this week
• templateflow / templateflow
  The TemplateFlow Archive - A DataLad super-dataset
  ☆92Updated last week
• bids-apps / HCPPipelines
  A BIDS App for minimal preprocessing using the HCP Pipelines
  ☆37Updated 2 months ago
• miykael / atlasreader
  Python interface for generating coordinate tables and region labels from statistical MRI images
  ☆111Updated this week
• nipreps / dmriprep
  dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…
  ☆73Updated 3 weeks ago
• MICA-MNI / BrainStat
  A statistics and context decoding toolbox for neuroimaging.
  ☆112Updated this week
• dutchconnectomelab / CATO
  Toolbox for structural and functional brain connectivity reconstruction.
  ☆18Updated last year
• layerfMRI / LAYNII
  Stand alone fMRI software suite for layer-fMRI analyses.
  ☆104Updated last week
• maartenmennes / ICA-AROMA
  ICA-AROMA Software Package: a data-driven method to identify and remove head motion-related artefacts from functional MRI data.
  ☆104Updated last year
• Deep-MI / fsqc
  A set of quality control scripts for FreeSurfer- and FastSurfer-processed structural MRI data
  ☆67Updated 2 months ago
• ReproNim / reproin
  A setup for automatic generation of shareable, version-controlled BIDS datasets from MR scanners
  ☆49Updated 6 months ago
• PennLINC / qsirecon
  Reconstruction of preprocessed q-space images (dMRI)
  ☆15Updated this week
• SIMEXP / load_confounds
  Load fMRIprep confounds in python
  ☆37Updated 3 years ago
• gllmflndn / gifti
  MATLAB/Octave GIfTI Library
  ☆27Updated 8 months ago
• khanlab / hippunfold
  BIDS App for Hippunfold (automated hippocampal unfolding and subfield segmentation)
  ☆61Updated last week
• nighres / nighres
  Processing tools for high-resolution neuroimaging
  ☆73Updated 11 months ago
• PennLINC / xcp_d
  Post-processing of fMRIPrep, NiBabies, and HCP outputs
  ☆102Updated last week
• murraylab / brainsmash
  Brain Surrogate Maps with Autocorrelated Spatial Heterogeneity
  ☆56Updated last year
• alexteghipco / brainSurfer
  MATLAB toolbox for visualizing brain data on surfaces.
  ☆36Updated 11 months ago
• arielletambini / denoiser
  Nuisance removal tool for fMRI data
  ☆57Updated last year
• miykael / parcellation_fragmenter
  Fragments FreeSurfer parcellation annotation in N-equal sized parcels
  ☆28Updated 5 years ago
• StuartJO / plotSurfaceROIBoundary
  Plot the boundaries of ROIs on a surface
  ☆70Updated 7 months ago
• faskowit / multiAtlasTT
  multi atlas transfer tools for neuroimaging (maTT)
  ☆67Updated last year
• nipreps / sdcflows
  Susceptibility Distortion Correction (SDC) workflows for EPI MR schemes
  ☆43Updated last week
• kwagstyl / surface_tools
  Tools for mesh surface-based operations
  ☆38Updated 8 months ago
• juryxy / JuSpace
  This is the repository for the JuSpace toolbox allowing for cross-modal correlations between imaging data and positron emission tomograph…
  ☆61Updated 7 months ago
• rordenlab / niimath
  niimath - a clone of fslmaths. Try the live demo:
  ☆71Updated last month