nipreps / fmriprep-notebooksLinks
A repository for notebooks associated with FMRIPREP
☆17Updated 6 years ago
Alternatives and similar repositories for fmriprep-notebooks
Users that are interested in fmriprep-notebooks are comparing it to the libraries listed below
Sorting:
- This repository contains all code for the BLMM toolbox.☆20Updated last year
- Nuisance removal tool for fMRI data☆57Updated last year
- Fragments FreeSurfer parcellation annotation in N-equal sized parcels☆28Updated 4 years ago
- A toolbox for ensemble-based multimodal gene-category enrichment analysis of human neuroimaging data. DEPRICATED! Succeeded by "NiSpace"☆19Updated 2 months ago
- ENIGMA HALFpipe is a user-friendly software that facilitates reproducible analysis of fMRI data☆99Updated this week
- Tools for mesh surface-based operations☆36Updated 5 months ago
- ComBat Family of Harmonization Methods☆20Updated 10 months ago
- bids application for processing functional MRI data, robust to scanner, acquisition and age variability.☆56Updated last month
- ciftiTools R package☆49Updated last month
- JuBrain Anatomy Toolbox☆20Updated 6 years ago
- Tool for automatic denoising, denoising strategies comparison, and functional connectivity data quality control.☆48Updated 2 years ago
- A package for publication-ready brain surface figures☆63Updated 11 months ago
- Python-based Reliability in MRI: Calculating Group level and Individual Level Similarity between runs and sessions.☆36Updated last year
- multi atlas transfer tools for neuroimaging (maTT)☆64Updated 8 months ago
- Run ICA-AROMA on fMRIPrep derivatives☆17Updated last week
- This is the repository for the JuSpace toolbox allowing for cross-modal correlations between imaging data and positron emission tomograph…☆55Updated 3 months ago
- The QDECR package for vertex-wise analyses in R☆12Updated 2 years ago
- ☆97Updated 8 years ago
- Probabilistic Threshold-Free Cluster Enhancement of Neuroimages☆41Updated last year
- A setup for automatic generation of shareable, version-controlled BIDS datasets from MR scanners☆49Updated 2 months ago
- This toolbox includes MATLAB scripts to perform a "spin test" of anatomical correspondence between cortical surface maps, as presented in…☆53Updated 4 years ago
- BayesfMRI R package☆30Updated last month
- Plot the boundaries of ROIs on a surface☆68Updated 4 months ago
- A BIDS App for minimal preprocessing using the HCP Pipelines☆36Updated 9 months ago
- An exemplary task analysis workflow to run on OpenNeuro's ds000003 data, after preprocessing with fMRIPrep☆31Updated 4 years ago
- Open Scripts and pipelines from the Multimodal Imaging and Connectome Analysis Lab at the Montreal Neurological Institute☆78Updated 2 months ago
- The code to generate individualize state-specific node-level parcellations. For the original paper, see Salehi et al., "There is no singl…☆9Updated 6 years ago
- Maps gene samples into surface parcellation☆19Updated 7 years ago
- Scripts for comparing different fmriprep denoising approaches on quality control functional connectivity (QC-FC) motion, QC-FC distance-d…☆15Updated 3 years ago
- Rough draft of a guide for reviewing fmriprep's QA outputs☆31Updated 3 years ago