blpercha / ebcLinks
A python implementation of the Ensemble Biclustering for Classification (EBC) algorithm. EBC is a co-clustering algorithm that allows you to perform co-clustering on very large, sparse, N-dimensional matrices.
☆20Updated 8 years ago
Alternatives and similar repositories for ebc
Users that are interested in ebc are comparing it to the libraries listed below
Sorting:
- Multimodal Transformers for biomedical text and Knowledge Graph data☆34Updated 2 years ago
- ☆34Updated 7 years ago
- Extracting biomedical relationships from literature with Snorkel 🏊☆58Updated 5 years ago
- SmuDGE: Semantic Disease Gene Embeddings☆12Updated 7 years ago
- Using pretrained language models for biomedical knowledge graph completion.☆47Updated 4 years ago
- A computational library for learning and evaluating biological knowledge graph embeddings - please see the main PyKEEN repo at https://gi…☆45Updated 3 years ago
- Drug repurposing for COVID-19 using literature-based discovery☆29Updated 3 years ago
- AGATHA: Automatic Graph-mining And Transformer based Hypothesis generation Approach☆61Updated 5 years ago
- Named Entity Recognition for biomedical entities☆49Updated 3 years ago
- OhmNet: Representation learning in multi-layer graphs☆84Updated 5 years ago
- 🏘️ Hubness reduced nearest neighbor search for entity alignment with knowledge graph embeddings☆27Updated last year
- ☆11Updated 8 years ago
- 📊 Results from the reproducibility and benchmarking studies presented in "Bringing Light Into the Dark: A Large-scale Evaluation of Know…☆36Updated 3 years ago
- Method for drug repurposing from knowledge graphs and literature☆36Updated 5 years ago
- ☆20Updated 4 years ago
- ☆64Updated 6 years ago
- a module to calculate the MeSH similarity☆26Updated 4 years ago
- Implements various negative sampling techniques for learning knowledge graph embeddings☆38Updated 6 years ago
- ☆29Updated 2 years ago
- Simple analyses and tutorials on the COVID-19 Knowledge Graph☆14Updated 5 years ago
- all-paths graph kernel for protein-protein interaction extraction☆12Updated 11 years ago
- Code for the paper: "edGNN: A simple and powerful GNN for labeled graphs"☆43Updated 2 years ago
- Bio relation extraction labeled dataset☆45Updated 3 years ago
- Predicting adverse drug reactions from a knowledge graph☆29Updated 4 years ago
- The reference implementation of FEATHER from the CIKM '20 paper "Characteristic Functions on Graphs: Birds of a Feather, from Statistical…☆50Updated 2 years ago
- COVID-19 Knowledge Graph: a computable, multi-modal, cause-and-effect knowledge model of COVID-19 pathophysiology☆43Updated 4 years ago
- ☆36Updated 8 years ago
- A set of benchmark repositories for node classification on knowledge graphs. To use, see https://github.com/pbloem/kgbench-loader☆28Updated 3 years ago
- Retrieve and process PubTator annotations☆44Updated 2 years ago
- ☆16Updated 7 years ago