Some of useful tcl scripts to analyse data from VMD
☆15Aug 2, 2022Updated 3 years ago
Alternatives and similar repositories for TCL_VMD_scripts
Users that are interested in TCL_VMD_scripts are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆11Aug 30, 2020Updated 5 years ago
- Input files for GROMACS tutorials written for the Journal of Physical Chemistry B☆24Jul 21, 2024Updated last year
- Convenience functions for VMD-TCL scripting☆14Apr 3, 2026Updated last month
- Main code repository for the PLUMED-GUI plugin for VMD☆17Jan 22, 2026Updated 3 months ago
- A tutorial code to perform Monte Carlo simulations of patchy particles☆12Dec 1, 2025Updated 5 months ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Examples of applications of pymbar to various problems in simulation and experiment☆23Jan 16, 2015Updated 11 years ago
- COBY (Coarse Grained System Builder) can be used to create coarse-grained systems in Martini 3☆47Apr 27, 2026Updated last week
- LOOS: a lightweight object-oriented structure analysis library☆130Mar 19, 2026Updated last month
- Tutorials of few enhanced sampling methods along with bash script to run the method in a single shot..☆48Feb 11, 2021Updated 5 years ago
- This script makes a cyclic peptide or cyclic nucleotide topology file for GROMACS out of (specially prepared) linear molecule topology fi…☆15Nov 24, 2020Updated 5 years ago
- scripts for analyzing molecular dynamics trajectories using VMD☆40May 28, 2015Updated 10 years ago
- Perl scripts to help out with material studio and CASTEP☆10Feb 18, 2015Updated 11 years ago
- Introduction to Scientific Visualization with Blender course☆21Mar 13, 2026Updated last month
- Density based object completion over PBC.☆30Apr 23, 2026Updated last week
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Materials for the 2021 PRACE Workshop @ SurfSARA☆30Nov 11, 2021Updated 4 years ago
- VMD Audio/Text control with natural language☆19May 12, 2021Updated 4 years ago
- Computational Statistical Mechanics Tutorials☆15Nov 29, 2012Updated 13 years ago
- Using neural networks for enhanced sampling in computational biophysics☆16Aug 17, 2017Updated 8 years ago
- Assessing the impact of mutations on antibody-antigen binding affinity☆18Dec 7, 2020Updated 5 years ago
- Code and examples to compute IR spectra from normal mode analysis☆15Jul 28, 2022Updated 3 years ago
- A repository providing jupyter notebooks and simulation inputs that accompany the mini course Hands-on tutorials: Advanced sampling metho…☆24Sep 26, 2024Updated last year
- ☆16Jul 28, 2022Updated 3 years ago
- Main code repository for FATSLiM☆23Feb 13, 2022Updated 4 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- In this repository, we will summarise the procedure of theoretical simulation in electrocatalytic system, it will be a huge task, but it …☆14Feb 23, 2021Updated 5 years ago
- Program for robust fitting of bonded Molecular Mechanics parameters☆15Jun 30, 2015Updated 10 years ago
- ☆13Jun 11, 2024Updated last year
- ☆28Jan 20, 2022Updated 4 years ago
- GridMAT-MD membrane analysis program☆25Sep 15, 2018Updated 7 years ago
- Tutorials and examples for nicer animations (movies) and images in PyMOL.☆21Jan 29, 2015Updated 11 years ago
- Restraintmaker is a tool intended to build Position or Distance restraints for Molecular Dynamics simulations (or any other simulation te…☆19Oct 27, 2022Updated 3 years ago
- Recharge and bill payment☆11May 5, 2021Updated 5 years ago
- MDAnalysis tool to calculate membrane curvature.☆35Apr 28, 2026Updated last week
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Workshop - Analysis of Molecular Dynamics Simulation Using Python☆20Aug 14, 2020Updated 5 years ago
- Gromacs topology template generator☆16Jul 15, 2021Updated 4 years ago
- ☆49Jun 15, 2020Updated 5 years ago
- ☆65Jul 25, 2025Updated 9 months ago
- Analysis of non-covalent interactions in MD trajectories☆68Jan 3, 2025Updated last year
- MM and QM/MM setup for a metalloprotein using GROMACS, Chemshell and ORCA (Using the CHARMM forcefield (both in GROMACS and with Chemshe…☆25Jun 8, 2024Updated last year
- Simple Molecular Dynamics code for Discovery-Driven approach to real gas properties.☆25Aug 23, 2022Updated 3 years ago