NSSAC / PatchSimLinks
Code for simulating the metapopulation SEIR model. Sample network for US national simulation included.
☆25Updated last year
Alternatives and similar repositories for PatchSim
Users that are interested in PatchSim are comparing it to the libraries listed below
Sorting:
- Age-structured SEIR model for COVID-19 outbreak in Wuhan, China☆40Updated 5 years ago
- Code for: The effect of human mobility and control measures on the COVID-19 epidemic in China☆22Updated 2 years ago
- A meta-population model for COVID19 in China☆11Updated 5 years ago
- COVID-ABS: An Agent-Based Model of COVID-19 Epidemic to Simulate Health and Economic Effects of Social Distancing Interventions☆88Updated 2 years ago
- ☆83Updated 3 years ago
- small template code to create a multilayer network using matplotlib and networkx☆115Updated 3 years ago
- Source code accompanying 'Mathematics of Epidemics on Networks' by Kiss, Miller, and Simon http://www.springer.com/us/book/9783319508047 …☆160Updated last year
- ☆12Updated last year
- Compartmental SEIQRD model to model the effects of government policies on SARS-CoV-2 spread in Belgium. Macro-economic Input-Output model…☆23Updated 6 months ago
- A human mobility flow-augmented stochastic SEIR-style epidemic modeling framework is developed, which combines with data assimilation and…☆14Updated 2 years ago
- Probabilistic generative model that incorporates both the topology of interactions and node attributes to extract overlapping communities…☆43Updated 2 years ago
- Epidemic simulation models of complex network.☆19Updated 8 years ago
- Create synthetic populations for COVID-19 epidemic analyses.☆47Updated 5 months ago
- spatio-temporal social network analysis and simulation☆49Updated 6 years ago
- Mathematical modelling of different strategies to reopen schools in the UK post COVID-19☆14Updated 3 years ago
- OpenABM-Covid19: an agent-based model for modelling the spread of SARS-CoV-2 (coronavirus) and control interventions for the Covid-19 epi…☆119Updated 2 years ago
- COVID-19 infectious forecasting using SEIR model and R0 estimation☆67Updated 4 years ago
- Code for "The effectiveness of backward contact tracing in networks"☆9Updated 4 years ago
- Spatiotemporal epidemic model introduced in the context of COVID-19, ACM TSAS, 2022☆75Updated last month
- COVID-19 related virus data, environmental data and policy data☆57Updated 3 years ago
- Temporal Motif Finder☆25Updated 8 years ago
- Bayesian modeling of COVID-19☆31Updated 2 years ago
- Fast code for SIR on temporal networks☆25Updated 3 years ago
- Extended state-space SIR epidemiological models☆75Updated 3 years ago
- ☆148Updated 4 years ago
- Predicting neighborhoods' socioeconomic attributes using restaurant data (PNAS)☆38Updated 5 years ago
- Code for generating Higher-order Network (HON) from data with higher-order dependencies☆68Updated last year
- Simple SEIR model Python script for the COVID-19 pandemic with real world data comparison.☆82Updated 4 years ago
- Temporal network visualization☆15Updated 4 years ago
- Python code for "Tracking R of COVID-19 A New Real-Time Estimation Using the Kalman Filter".☆27Updated 2 years ago