Code for simulating the metapopulation SEIR model. Sample network for US national simulation included.
☆26Sep 3, 2025Updated 10 months ago
Alternatives and similar repositories for PatchSim
Users that are interested in PatchSim are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Mathematical modelling of different strategies to reopen schools in the UK post COVID-19☆14Apr 21, 2022Updated 4 years ago
- Collects officially published daily stats for the corona-virus (China only) 收集新冠状病毒中国每日疫情数据，精确到地级☆29Feb 25, 2020Updated 6 years ago
- This project holds a line-list data (including mobility and exposure history, as well as epidemiological Timelines) of 10,000+ COVID-19 c…☆14Apr 28, 2023Updated 3 years ago
- A human mobility flow-augmented stochastic SEIR-style epidemic modeling framework is developed, which combines with data assimilation and…☆15Mar 10, 2023Updated 3 years ago
- Code for "The effectiveness of backward contact tracing in networks"☆10Apr 7, 2021Updated 5 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆13Nov 1, 2022Updated 3 years ago
- Microscopic Markov Chain Approach to model the spreading of COVID-19☆19Apr 26, 2021Updated 5 years ago
- A meta-population model for COVID19 in China☆11Jun 10, 2020Updated 6 years ago
- 百度迁徙数据爬虫☆41Jul 10, 2021Updated 5 years ago
- This dataset contains all the 2020 COVID-19 related data from the paper "An Augmented Multilingual Twitter Dataset for Studying the COVID…☆11Jan 20, 2022Updated 4 years ago
- A package containing several useful R-functions for reading and plotting the results of Birth-Death Skyline (BDSKY) runs in BEAST2.☆12Nov 28, 2018Updated 7 years ago
- Inferring high-resolution human mixing patterns for disease modeling☆49Dec 8, 2022Updated 3 years ago
- COVID-ABS: An Agent-Based Model of COVID-19 Epidemic to Simulate Health and Economic Effects of Social Distancing Interventions☆91Sep 15, 2022Updated 3 years ago
- Modelling transmission dynamics of COVID-19, while accounting for presymptomatic infectiousness, time-varying ascertainment rates, transm…☆22Jul 18, 2020Updated 6 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆32Mar 27, 2020Updated 6 years ago
- [ECML-PKDD2022] EpiGNN: Exploring Spatial Transmission with Graph Neural Network for Regional Epidemic Forecasting☆31Oct 25, 2022Updated 3 years ago
- Generalized SEIR Epidemic Model (fitting and computation)☆92Apr 11, 2024Updated 2 years ago
- Computes trajectories for evolutionary dynamics.☆15Oct 6, 2020Updated 5 years ago
- A library of MATLAB functions for visualization, processing, and analysis of output from Bayesian models fit with Stan.☆10Dec 17, 2021Updated 4 years ago
- This repository contains python implementations of scoring rules for forecasts provided in a prediction interval format.☆11Jul 31, 2020Updated 5 years ago
- Ordinary differential equation solver & network simulator.☆12Feb 28, 2023Updated 3 years ago
- Data and Codebook for the HIT-COVID Project☆22May 19, 2021Updated 5 years ago
- Evolutionary Game Theory Simulator☆11Jun 8, 2018Updated 8 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Predicting COVID-19 pandemic by spatio-temporal graph neural networks https://arxiv.org/abs/2305.07731☆12Oct 27, 2023Updated 2 years ago
- Codes and Datasets for our SIGIR 2021 Paper: "Understanding the Role of Affect Dimensions in Detecting Emotions from Tweets: A Multi-task…☆12Apr 21, 2021Updated 5 years ago
- Plotting a simplex for three player evolutionary games with python☆10Apr 16, 2018Updated 8 years ago
- Basic Epidemic, Activity, and Response COVID-19 model☆31Jul 6, 2020Updated 6 years ago
- ☆24Oct 23, 2020Updated 5 years ago
- This repository contains the geatpy implementation for paper: Co-operative Prediction Strategy for Solving Dynamic Multi-Objective Optimi…☆10Sep 30, 2020Updated 5 years ago
- This is the raw data repository (policy record format) of the CoronaNet project on government responses to the COVID-19 pandemic.☆101Dec 2, 2023Updated 2 years ago
- This repository contains the code for the paper "Percolation of temporal hierarchical mobility networks during COVID-19".☆15Nov 13, 2024Updated last year
- The companion repository to Computational Modeling of Infectious Disease by Chris von Csefalvay☆11Dec 15, 2022Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- The COVID-19 Real World Worry Datasets☆27Nov 24, 2021Updated 4 years ago
- ☆19Apr 4, 2022Updated 4 years ago
- ☆10Jul 9, 2020Updated 6 years ago
- (POSTER SESSION) A study of spatial dynamics under prisoners' dilemma and hawk-dove games, by Sangman Jung and Sunmi Lee☆15Apr 16, 2021Updated 5 years ago
- A repository of example Jupyter notebooks☆26Mar 29, 2018Updated 8 years ago
- simple tutorial on evolutionary game theory☆19Nov 22, 2023Updated 2 years ago
- An R package for Bayes Linear emulation and history matching.☆19Dec 1, 2025Updated 7 months ago