UofABioinformaticsHub / RNAseq_snakemakeView external linksLinks
Bioinformatics Hub RNAseq snakemake pipeline
☆13Jan 30, 2018Updated 8 years ago
Alternatives and similar repositories for RNAseq_snakemake
Users that are interested in RNAseq_snakemake are comparing it to the libraries listed below
Sorting:
- Bulk RNA-seq Data Processing, Quality Control, and Downstream Analysis Pipeline☆21Jan 30, 2026Updated 2 weeks ago
- ☆11Updated this week
- class materials for MCB517A through UW/Fred Hutch☆12Dec 5, 2019Updated 6 years ago
- Overview of the machine learning project and various sub-tasks.☆10Updated this week
- Transcriptional regulatory network inference from gene expression and prior information with LASSO-StARS☆15May 3, 2022Updated 3 years ago
- computational training at Fred Hutch☆12Jun 11, 2021Updated 4 years ago
- Code and results from TotalSeqC antibody titration and pipeline benchmarking for CITE-seq experiments☆10Mar 13, 2021Updated 4 years ago
- The Genomics Tertiary Analysis and Machine Learning Using Amazon SageMaker solution creates a scalable environment in AWS to develop mach…☆11Jul 7, 2023Updated 2 years ago
- SUmmarizing Multiple Enrichment analysis Results☆10Nov 14, 2024Updated last year
- A software suite for Probe Design and Proximity Detection for targeted chromosome conformation capture applications☆12Feb 4, 2026Updated last week
- Convert "Complete National Geographic" CNG files to JPG for use under Linux☆10Apr 8, 2024Updated last year
- Software for creating and comparing genome fingerprints.☆11Jun 30, 2024Updated last year
- ☆13Nov 30, 2018Updated 7 years ago
- Supporting material of talks given at useR!2024☆13Jul 12, 2024Updated last year
- Public repository of Google Colab notebooks to use with Phenix☆12Mar 19, 2025Updated 10 months ago
- Python3 Read Until API implementation☆11Mar 11, 2020Updated 5 years ago
- The Bio-Data Club at the Moffitt Cancer Center☆14Dec 5, 2025Updated 2 months ago
- A frontend for predictive modeling with tidymodels☆22Aug 28, 2025Updated 5 months ago
- ☆14May 30, 2023Updated 2 years ago
- isoCirc☆10Nov 27, 2023Updated 2 years ago
- Declarative group-wise count and compute, describing your target table☆13Jan 8, 2026Updated last month
- Shiny Framework for reproducible content - Create table in Shiny, then run a production step (on HPC GRID) and compare table objects for …☆12May 9, 2024Updated last year
- A collection of awesome lipidomics tools and resources☆17Jun 23, 2022Updated 3 years ago
- ☆10Aug 22, 2018Updated 7 years ago
- Protein common interface databases☆10Apr 13, 2019Updated 6 years ago
- Shiny app for visualization, exploration of mouse brain single cell gene expression☆11Oct 31, 2018Updated 7 years ago
- ☆15Jul 18, 2023Updated 2 years ago
- Mean Alterations Using Discrete Expression☆14Apr 9, 2024Updated last year
- A cloud-based deployment of the 10x Genomics Cell Ranger software☆14Jul 7, 2019Updated 6 years ago
- S3norm ver2 + IDEAS epigenetic state / master peak list☆12Sep 22, 2023Updated 2 years ago
- Constructing gene regulatory networks by integrating scRNA-seq and scATAC-seq data☆13Dec 7, 2021Updated 4 years ago
- Python package for creating, calibrating and simulating RBA models☆13Jun 5, 2023Updated 2 years ago
- OSS licenses in reStructuredText format☆14Jan 17, 2018Updated 8 years ago
- Repo for Dynamic Statistical Comparisons project☆13Feb 5, 2024Updated 2 years ago
- Interactive visual analytic tool for exploring epigenomics data w/ associated metadata, powered by HiGlass and Gosling☆13Nov 10, 2023Updated 2 years ago
- Shiny apps for testing☆20Aug 15, 2014Updated 11 years ago
- Pathway-Regularized Matrix Factorization☆12Apr 6, 2020Updated 5 years ago
- An R package to detect selection in biological pathways☆14Jan 19, 2024Updated 2 years ago
- Multi-Omic Strategies for TWAS☆13Mar 27, 2023Updated 2 years ago