Alternatives and similar repositories for CCS

Users that are interested in CCS are comparing it to the libraries listed below

• juryxy / JuSpace
  This is the repository for the JuSpace toolbox allowing for cross-modal correlations between imaging data and positron emission tomograph…
  ☆60Updated 5 months ago
• MICA-MNI / micaopen
  Open Scripts and pipelines from the Multimodal Imaging and Connectome Analysis Lab at the Montreal Neurological Institute
  ☆80Updated 4 months ago
• MidnightScanClub / MSCcodebase
  The Midnight Scanning Club Codebase
  ☆37Updated 6 years ago
• NeuroanatomyAndConnectivity / gradient_analysis
  ☆99Updated 8 years ago
• spin-test / spin-test
  This toolbox includes MATLAB scripts to perform a "spin test" of anatomical correspondence between cortical surface maps, as presented in…
  ☆54Updated 5 years ago
• Qoala-T / QC
  Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data
  ☆77Updated 4 years ago
• Washington-University / cifti-matlab
  MATLAB code for reading and writing CIFTI connectivity files
  ☆67Updated 11 months ago
• KirstieJane / NSPN_WhitakerVertes_PNAS2016
  Data and analysis code to reproduce the NSPN Manuscript "Adolescence is associated with genomically patterned consolidation of the hubs o…
  ☆41Updated 8 years ago
• MICA-MNI / BrainStat
  A statistics and context decoding toolbox for neuroimaging.
  ☆109Updated 11 months ago
• sina-mansour / UKB-connectomics
  This repository will host scripts used to map structural and functional brain connectivity matrices for the UK biobank dataset.
  ☆68Updated last year
• faskowit / multiAtlasTT
  multi atlas transfer tools for neuroimaging (maTT)
  ☆65Updated 10 months ago
• SarahMorgan / Morphometric_Similarity_SZ
  Morphometric similarity in psychosis- data and code
  ☆49Updated 6 years ago
• frantisekvasa / rotate_parcellation
  Code (in Matlab and R) to perform a spherical rotation (permutation) of a parcellated cortical map.
  ☆46Updated 2 years ago
• StuartJO / plotSurfaceROIBoundary
  Plot the boundaries of ROIs on a surface
  ☆68Updated 5 months ago
• NotaCS / Functionnectome
  Project your functional brain signal onto the white matter, and explore the pathways supporting brain functions.
  ☆31Updated last year
• MICA-MNI / ENIGMA
  The ENIGMA Toolbox is an open-source repository for accessing 100+ ENIGMA statistical maps, visualizing cortical and subcortical surface …
  ☆162Updated 2 months ago
• murraylab / brainsmash
  Brain Surrogate Maps with Autocorrelated Spatial Heterogeneity
  ☆50Updated last year
• alexteghipco / brainSurfer
  MATLAB toolbox for visualizing brain data on surfaces.
  ☆35Updated 9 months ago
• arielletambini / denoiser
  Nuisance removal tool for fMRI data
  ☆57Updated last year
• maartenmennes / ICA-AROMA
  ICA-AROMA Software Package: a data-driven method to identify and remove head motion-related artefacts from functional MRI data.
  ☆101Updated last year
• andy1764 / ComBatFamily
  ComBat Family of Harmonization Methods
  ☆22Updated 2 weeks ago
• trendscenter / gift
  Group ICA/IVA software (MATLAB)
  ☆92Updated this week
• kwagstyl / surface_tools
  Tools for mesh surface-based operations
  ☆37Updated 6 months ago
• andersonwinkler / PALM
  PALM: Permutation Analysis of Linear Models
  ☆78Updated 4 months ago
• isebenius / MIND
  This repository contains a Python implementation of Morphometric INverse Divergence (MIND) calculation for the estimation of structural s…
  ☆40Updated last year
• PennLINC / xcp_d
  Post-processing of fMRIPrep, NiBabies, and HCP outputs
  ☆102Updated this week
• netneurolab / hansen_receptors
  Data and code supporting Hansen et al., 2022 Nature Neuroscience "Mapping neurotransmitter systems to the structural and functional organ…
  ☆103Updated 2 years ago
• gllmflndn / gifti
  MATLAB/Octave GIfTI Library
  ☆27Updated 6 months ago
• HALFpipe / HALFpipe
  ENIGMA HALFpipe is a user-friendly software that facilitates reproducible analysis of fMRI data
  ☆104Updated this week
• neurodata / neuroparc
  ☆196Updated 2 years ago