Alternatives and similar repositories for CCS

Users that are interested in CCS are comparing it to the libraries listed below

• faskowit / multiAtlasTT
  multi atlas transfer tools for neuroimaging (maTT)
  ☆68Updated last year
• juryxy / JuSpace
  This is the repository for the JuSpace toolbox allowing for cross-modal correlations between imaging data and positron emission tomograph…
  ☆65Updated last week
• MICA-MNI / micaopen
  Open Scripts and pipelines from the Multimodal Imaging and Connectome Analysis Lab at the Montreal Neurological Institute
  ☆83Updated 9 months ago
• NeuroanatomyAndConnectivity / gradient_analysis
  ☆106Updated 8 years ago
• MICA-MNI / BrainStat
  A statistics and context decoding toolbox for neuroimaging.
  ☆116Updated last week
• trendscenter / gift
  Group ICA/IVA software (MATLAB)
  ☆97Updated last week
• MidnightScanClub / MSCcodebase
  The Midnight Scanning Club Codebase
  ☆38Updated 6 years ago
• spin-test / spin-test
  This toolbox includes MATLAB scripts to perform a "spin test" of anatomical correspondence between cortical surface maps, as presented in…
  ☆57Updated 5 years ago
• frantisekvasa / rotate_parcellation
  Code (in Matlab and R) to perform a spherical rotation (permutation) of a parcellated cortical map.
  ☆49Updated 2 years ago
• StuartJO / plotSurfaceROIBoundary
  Plot the boundaries of ROIs on a surface
  ☆72Updated 10 months ago
• HALFpipe / HALFpipe
  ENIGMA HALFpipe is a user-friendly software that facilitates reproducible analysis of fMRI data
  ☆113Updated this week
• edickie / ciftify
  The tools of the Human Connectome Project (HCP) adapted for working with non-HCP datasets
  ☆130Updated 3 years ago
• KirstieJane / NSPN_WhitakerVertes_PNAS2016
  Data and analysis code to reproduce the NSPN Manuscript "Adolescence is associated with genomically patterned consolidation of the hubs o…
  ☆42Updated 8 years ago
• andy1764 / ComBatFamily
  ComBat Family of Harmonization Methods
  ☆29Updated 2 weeks ago
• Washington-University / cifti-matlab
  MATLAB code for reading and writing CIFTI connectivity files
  ☆69Updated last year
• PennLINC / xcp_d
  Post-processing of fMRIPrep, NiBabies, and HCP outputs
  ☆107Updated this week
• Qoala-T / QC
  Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data
  ☆78Updated 4 years ago
• ColeLab / ColeAnticevicNetPartition
  Public release of The Cole-Anticevic Brain-wide Network Partition (CAB-NP)
  ☆83Updated 5 years ago
• maartenmennes / ICA-AROMA
  ICA-AROMA Software Package: a data-driven method to identify and remove head motion-related artefacts from functional MRI data.
  ☆104Updated last year
• SarahMorgan / Morphometric_Similarity_SZ
  Morphometric similarity in psychosis- data and code
  ☆52Updated 6 years ago
• alexteghipco / brainSurfer
  MATLAB toolbox for visualizing brain data on surfaces.
  ☆36Updated last year
• netneurolab / hansen_receptors
  Data and code supporting Hansen et al., 2022 Nature Neuroscience "Mapping neurotransmitter systems to the structural and functional organ…
  ☆118Updated 3 years ago
• eminSerin / NBS-Predict
  A prediction-based extension of network-based statistics.
  ☆36Updated last month
• jdiedrichsen / suit
  Toolbox for the analysis of cerebellar imaging data
  ☆23Updated last year
• isebenius / MIND
  This repository contains a Python implementation of Morphometric INverse Divergence (MIND) calculation for the estimation of structural s…
  ☆49Updated last year
• arielletambini / denoiser
  Nuisance removal tool for fMRI data
  ☆57Updated last year
• rmarkello / abagen
  A toolbox for working with Allen Human Brain Atlas microarray expression data
  ☆112Updated last year
• NotaCS / Functionnectome
  Project your functional brain signal onto the white matter, and explore the pathways supporting brain functions.
  ☆35Updated last year
• canlab / Neuroimaging_Pattern_Masks
  Brain signature patterns, atlases of regions, and meta-analysis masks for neuroimaging data analysis.
  ☆128Updated 2 months ago
• templateflow / templateflow
  The TemplateFlow Archive - A DataLad super-dataset
  ☆93Updated last month