uf-hobi-informatics-lab / GatorTronGPT
☆40Updated last year
Alternatives and similar repositories for GatorTronGPT:
Users that are interested in GatorTronGPT are comparing it to the libraries listed below
- all scripts used in gatortron project☆114Updated last year
- General tutorials for the setup and use of MedCAT.☆37Updated 2 months ago
- Clinical text summarization by adapting large language models☆137Updated 7 months ago
- Large Language Models to Identify Social Determinants of Health in Electronic Health Records | Paper: https://www.nature.com/articles/s41…☆43Updated last year
- Expert-Curated Oncology Reports to Advance Language Model Inference☆27Updated 11 months ago
- Deep Generative Modelling of Patient Timelines using Electronic Health Records☆55Updated last year
- A Python Natural Language Processing Toolkit for Medical Text Generation☆76Updated 5 months ago
- Biomedical Question Answering Datasets.☆99Updated last year
- PMC-Patients: A Large-scale Dataset of Patient Summaries and Relations for Benchmarking Retrieval-based Clinical Decision Support Systems…☆63Updated last year
- Official Codes for "Publicly Shareable Clinical Large Language Model Built on Synthetic Clinical Notes"☆104Updated 7 months ago
- MedAlign is a clinician-generated dataset for instruction following with electronic medical records.☆94Updated last year
- Code for MedCPT, a model for zero-shot biomedical information retrieval.☆169Updated last year
- ☆59Updated last year
- A comprehensive NLP preprocessing package for clinical notes sentence boundary detection, tokenization☆30Updated 10 months ago
- ☆29Updated 3 years ago
- a library for named entity recognition developed by UF HOBI NLP lab featuring SOTA algorithms☆146Updated last year
- jayetri / DrugEHRQA-A-Question-Answering-Dataset-on-Structured-and-Unstructured-Electronic-Health-Records☆9Updated 2 years ago
- The project was to build and release the first publicly available code evidence dataset called MDACE on a subset of the MIMIC-III clinica…☆27Updated last year
- MEDIQA-Chat Shared Tasks @ ACL-ClinicalNLP 2023☆50Updated last year
- Almanac: Retrieval-Augmented Language Models for Clinical Medicine☆31Updated last year
- NeurIPS'24 DB (Spotlight) | Instruction Tuning Large Language Models to Understand Electronic Health Records☆30Updated 3 months ago
- PLM-ICD: Automatic ICD Coding with Pretrained Language Models☆65Updated last year
- A deidentifier / deidentification pipeline developed by Stanford and Penn as part of the MIDRC organization.☆84Updated 9 months ago
- A simple python library for ICD-10-CM codes☆65Updated 2 months ago
- A new collection of 1.7k doctor-patient conversations and corresponding clinical notes/summaries.☆70Updated last year
- ☆79Updated 7 months ago
- Code repository for BEEP (Biomedical Evidence Enhanced Predictions) clinical outcome prediction system☆26Updated last year
- public code repository for paper "Health system scale language models are general purpose clinical prediction engines"☆111Updated last year
- Official repository of "EHR-SeqSQL : A Sequential Text-to-SQL Dataset For Interactively Exploring Electronic Health Records" (ACL 2024 Fi…☆15Updated 8 months ago
- PMC-Patients☆92Updated 9 months ago