Alternatives and similar repositories for GatorTronGPT

Users that are interested in GatorTronGPT are comparing it to the libraries listed below

• StanfordMIMI / clin-summ
  Clinical text summarization by adapting large language models
  ☆150Updated last year
• uf-hobi-informatics-lab / GatorTron
  all scripts used in gatortron project
  ☆128Updated 2 years ago
• Yale-LILY / Ascle
  A Python Natural Language Processing Toolkit for Medical Text Generation
  ☆84Updated 6 months ago
• pmc-patients / pmc-patients
  PMC-Patients: A Large-scale Dataset of Patient Summaries and Relations for Benchmarking Retrieval-based Clinical Decision Support Systems…
  ☆72Updated last year
• starmpcc / Asclepius
  Official Codes for "Publicly Shareable Clinical Large Language Model Built on Synthetic Clinical Notes"
  ☆113Updated last year
• som-shahlab / medalign
  MedAlign is a clinician-generated dataset for instruction following with electronic medical records.
  ☆99Updated 6 months ago
• luoyuanlab / Clinical-Longformer
  ☆63Updated 2 years ago
• MadhumitaSushil / OncLLMExtraction
  Expert-Curated Oncology Reports to Advance Language Model Inference
  ☆30Updated last year
• glee4810 / EHRSQL
  [NeurIPS'22] EHRSQL: A Practical Text-to-SQL Benchmark for Electronic Health Records
  ☆95Updated last year
• ncbi / MedCPT
  Code for MedCPT, a model for zero-shot biomedical information retrieval.
  ☆220Updated last year
• qingyu-qc / gpt_bionlp_benchmark
  ☆25Updated last year
• Andy-jqa / biomedical-qa-datasets
  Biomedical Question Answering Datasets.
  ☆119Updated 7 months ago
• CogStack / Foresight
  Deep Generative Modelling of Patient Timelines using Electronic Health Records
  ☆66Updated 5 months ago
• MIDRC / Stanford_Penn_MIDRC_Deidentifier
  A deidentifier / deidentification pipeline developed by Stanford and Penn as part of the MIDRC organization.
  ☆96Updated 2 weeks ago
• XZhang97666 / AlpaCare
  ☆94Updated 10 months ago
• CogStack / MedCATtutorials
  General tutorials for the setup and use of MedCAT.
  ☆40Updated 6 months ago
• AIM-Harvard / ChatGPT_NCCN
  Code base, outputs, scoring guidelines and annotations for ChatGPT NCCN evaluation | Paper: https://jamanetwork.com/journals/jamaoncology…
  ☆18Updated 2 years ago
• zzachw / llemr
  NeurIPS'24 DB (Spotlight) | Instruction Tuning Large Language Models to Understand Electronic Health Records
  ☆53Updated 3 months ago
• google-deepmind / codoc
  ☆117Updated 2 years ago
• BIDS-Xu-Lab / Me-LLaMA
  A novel medical large language model family with 13/70B parameters, which have SOTA performances on various medical tasks
  ☆165Updated 10 months ago
• AIM-Harvard / SDoH
  Large Language Models to Identify Social Determinants of Health in Electronic Health Records | Paper: https://www.nature.com/articles/s41…
  ☆48Updated last year
• allenai / BEEP
  Code repository for BEEP (Biomedical Evidence Enhanced Predictions) clinical outcome prediction system
  ☆26Updated 2 years ago
• uf-hobi-informatics-lab / NLPreprocessing
  A comprehensive NLP preprocessing package for clinical notes sentence boundary detection, tokenization
  ☆32Updated last year
• microsoft / clinical-self-verification
  Self-verification for LLMs.
  ☆67Updated 2 years ago
• vlievin / medical-reasoning
  Medical reasoning using large language models
  ☆92Updated last year
• seonhee99 / EHR-SeqSQL
  Official repository of "EHR-SeqSQL : A Sequential Text-to-SQL Dataset For Interactively Exploring Electronic Health Records" (ACL 2024 Fi…
  ☆16Updated last year
• bvanaken / clinical-outcome-prediction
  Code for the EACL 2021 Paper: Clinical Outcome Prediction from Admission Notes using Self-Supervised Knowledge Integration
  ☆96Updated last year
• yhydhx / ChatGPT-API
  Implements ChatGPT API via request package.
  ☆47Updated 2 years ago
• Machine-Learning-for-Medical-Language / cnlp_transformers
  Transformers for Clinical NLP
  ☆25Updated 4 months ago
• BayesRulez / snomed_el_baseline_model
  Basic entity linker for the SNOMED EL Challenge
  ☆13Updated last year