BioMedIA / dhcp-structural-pipeline
structural analysis of neonatal brain MRI scans
☆52Updated 3 years ago
Alternatives and similar repositories for dhcp-structural-pipeline:
Users that are interested in dhcp-structural-pipeline are comparing it to the libraries listed below
- niimath - a clone of fslmaths. Try the live demo:☆60Updated 2 months ago
- Single Shell Free Water Elimination Model for Diffusion Tensor Imaging☆24Updated last year
- Distortion correction of diffusion weighted MRI without reverse phase-encoding scans or field-maps☆67Updated 8 months ago
- An automated pipeline for integrated preprocessing and quality assurance of diffusion weighted MRI images☆48Updated 7 months ago
- Bash script to compute DTI-ALPS☆45Updated last month
- Automated Fiber Quantification☆77Updated last year
- A set of quality control scripts for FreeSurfer- and FastSurfer-processed structural MRI data☆63Updated 4 months ago
- ExploreASL: releases can be found in the main branch or within the releases tab. If you want to contribute, please contact us at h.j.muts…☆51Updated this week
- Multimodal Surface Matching with Higher order Clique Reduction: Mac OS and Linux binaries☆37Updated 2 years ago
- The Sherbrooke Connectivity Imaging Lab (SCIL) Python dMRI processing toolbox☆65Updated last week
- Multi-site dMRI harmonization☆47Updated this week
- A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)☆63Updated this week
- White matter tractography clustering and more...☆72Updated 2 months ago
- ☆35Updated 3 years ago
- Preprocessing of arterial spin labeling (ASL) data☆48Updated this week
- Please visit our new location: https://github.com/tractometry/pyAFQ☆59Updated 5 months ago
- Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data☆76Updated 4 years ago
- The open source toolbox for reproducible diffusion MRI-based microstructure estimation☆105Updated 3 months ago
- A workflow to allow Freesurfer recon-all to run on brain image with gliomas☆29Updated 9 months ago
- Segmentation of Choroid Plexus using Gaussian Mixture Model☆14Updated this week
- Notes for the dHCP data release☆14Updated 10 months ago
- Purifibre removes spurious streamlines from tractograms☆10Updated 2 years ago
- Processing tools for high-resolution neuroimaging☆72Updated 4 months ago
- Diffusion parameter EStImation with Gibbs and NoisE Removal pipeline☆51Updated last year
- Weakly supervised perivascular spaces segmentation with salient guidance of Frangi filter☆12Updated last year
- Ironsmith is a comprehensive, fully automated pipeline for creating and processing Quantitative Susceptibility Maps (QSM), extracting QSM…☆22Updated last year
- Harmonization tools for multi-site neuroimaging analysis. Implemented as a python package. Harmonization of MRI, sMRI, dMRI, fMRI variabl…☆90Updated this week
- Open-source eddy-current and head-motion correction for dMRI.☆15Updated last month
- BIDS app wrapping recon-all from FreeSurfer☆42Updated 4 months ago
- dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…☆66Updated last year