npnl / PALS
Pipeline for Analysing Lesions after Stroke (PALS) is a scalable and user-friendly toolbox designed to facilitate standardised analysis and ensure quality in stroke research using T1-weighted MRIs
☆24Updated last month
Alternatives and similar repositories for PALS:
Users that are interested in PALS are comparing it to the libraries listed below
- A workflow to allow Freesurfer recon-all to run on brain image with gliomas☆29Updated 10 months ago
- Distortion correction of diffusion weighted MRI without reverse phase-encoding scans or field-maps☆69Updated 9 months ago
- A set of quality control scripts for FreeSurfer- and FastSurfer-processed structural MRI data☆63Updated 5 months ago
- ☆36Updated 3 years ago
- An automated pipeline for integrated preprocessing and quality assurance of diffusion weighted MRI images☆50Updated 9 months ago
- Preprocessing of arterial spin labeling (ASL) data☆48Updated last week
- Scripts to prepare MP2RAGE for Freesurfer☆27Updated last year
- Single Shell Free Water Elimination Model for Diffusion Tensor Imaging☆25Updated last year
- niimath - a clone of fslmaths. Try the live demo:☆60Updated 4 months ago
- Perivascular (PVS) or Virchow–Robin Spaces (VRS) segmentation with a 3D Unet☆27Updated 6 months ago
- Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data☆76Updated 4 years ago
- mrQ_BoxJoinBox☆22Updated last year
- DICOM to NIfTI conversion, NIfTI tools☆95Updated 8 months ago
- Segmentation of Choroid Plexus using Gaussian Mixture Model☆15Updated last month
- ExploreASL: releases can be found in the main branch or within the releases tab. If you want to contribute, please contact us at h.j.muts…☆53Updated 2 weeks ago
- Automated Fiber Quantification☆77Updated last year
- White matter tractography clustering and more...☆76Updated last month
- Multi-site dMRI harmonization☆47Updated this week
- ☆11Updated 2 years ago
- Bash script to compute DTI-ALPS☆50Updated 2 months ago
- atlasBREX: Automated averaged template-derived brain extraction in animal MRI☆16Updated last year
- The Sherbrooke Connectivity Imaging Lab (SCIL) Python dMRI processing toolbox☆68Updated this week
- fMRIPrep Lifespan - A robust, transparent workflow tailored for neonate and infant MRI☆30Updated last week
- Neuro Imaging Chart of AI-based Imaging Biomarkers☆20Updated this week
- DeepPrep: An accelerated, scalable, and robust pipeline for neuroimaging preprocessing empowered by deep learning☆78Updated 3 months ago
- Structural Neuroimaging Analysis in Python☆29Updated last week
- A re-implementation of antsMultivariateTemplateConstruction2.sh using optimized image pyramid scale-space and qbatch support☆27Updated last week
- dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…☆67Updated last year
- A suite of brain PET processing pipelines☆14Updated 4 months ago
- Convolutional Neural Network trained for age prediction using a large (n=11,729) set of MRI scans from a highly diversified cohort spanni…☆50Updated 4 years ago