Alternatives and similar repositories for PALS

Users that are interested in PALS are comparing it to the libraries listed below

• MASILab / Synb0-DISCO
  Distortion correction of diffusion weighted MRI without reverse phase-encoding scans or field-maps
  ☆79Updated 2 months ago
• Deep-MI / fsqc
  A set of quality control scripts for FreeSurfer- and FastSurfer-processed structural MRI data
  ☆65Updated last month
• KUL-Radneuron / KUL_VBG
  A workflow to allow Freesurfer recon-all to run on brain image with gliomas
  ☆31Updated last year
• mezera / mrQ
  mrQ_BoxJoinBox
  ☆22Updated 2 years ago
• SlicerDMRI / whitematteranalysis
  White matter tractography clustering and more...
  ☆80Updated 4 months ago
• PennLINC / aslprep
  Preprocessing of arterial spin labeling (ASL) data
  ☆51Updated last week
• PennLINC / qsiprep
  Preprocessing of diffusion MRI
  ☆165Updated 2 months ago
• neurolabusc / Clinical
  Clinical Toolbox for SPM (https://www.nitrc.org/projects/clinicaltbx/)
  ☆47Updated 4 years ago
• ExploreASL / ExploreASL
  ExploreASL: releases can be found in the main branch or within the releases tab. If you want to contribute, please contact us at h.j.muts…
  ☆54Updated this week
• srikash / presurfer
  Scripts to prepare MP2RAGE for Freesurfer
  ☆28Updated 2 years ago
• Qoala-T / QC
  Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data
  ☆77Updated 4 years ago
• nipreps / smriprep
  Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)
  ☆153Updated this week
• vishnubashyam / DeepBrainNet
  Convolutional Neural Network trained for age prediction using a large (n=11,729) set of MRI scans from a highly diversified cohort spanni…
  ☆55Updated 5 years ago
• hMRI-group / hMRI-toolbox
  A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)
  ☆73Updated last week
• xiangruili / dicm2nii
  DICOM to NIfTI conversion, NIfTI tools
  ☆102Updated 2 months ago
• MASILab / PreQual
  An automated pipeline for integrated preprocessing and quality assurance of diffusion weighted MRI images
  ☆52Updated last year
• scilus / scilpy
  The Sherbrooke Connectivity Imaging Lab (SCIL) Python dMRI processing toolbox
  ☆77Updated 2 weeks ago
• Conxz / multiBrain
  A list of brain imaging datasets with multiple scans per subject. Feel free to update the list via 'pull requests'!
  ☆99Updated 7 months ago
• CoBrALab / atlases
  Segmentations of Neuroanatomy on Hi-Res T1 and T2 MRIs and publicly available population averages in MNI space
  ☆34Updated 2 years ago
• nipreps / dmriprep
  dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…
  ☆71Updated last week
• yeatmanlab / AFQ
  Automated Fiber Quantification
  ☆77Updated last year
• rpomponio / neuroHarmonize
  Harmonization tools for multi-site neuroimaging analysis. Implemented as a python package. Harmonization of MRI, sMRI, dMRI, fMRI variabl…
  ☆113Updated this week
• braincharter / vasculature
  Region- and voxel-based probabilistic mapping of whole-brain veins and arteries (densities and diameter) in the MNI space
  ☆50Updated 3 years ago
• pnlbwh / dMRIharmonization
  Multi-site dMRI harmonization
  ☆49Updated 5 months ago
• sameerd / DiffusionTensorImaging
  Single Shell Free Water Elimination Model for Diffusion Tensor Imaging
  ☆30Updated last year
• neurolabusc / nii_preprocess
  nii_preprocess adapted for LARC and ABC studies at UofSC
  ☆23Updated 3 years ago
• nipreps / niworkflows
  Common workflows for MRI (anatomical, functional, diffusion, etc)
  ☆105Updated this week
• rordenlab / niimath
  niimath - a clone of fslmaths. Try the live demo:
  ☆70Updated last week
• nighres / nighres
  Processing tools for high-resolution neuroimaging
  ☆71Updated 11 months ago
• CoBrALab / RABIES
  fMRI preprocessing pipeline and analysis tools adapted for rodent images. Visit the full documentation at https://rabies.readthedocs.io/
  ☆46Updated this week