JoostJM / SlicerCaseIteratorLinks
Simple Scripted Module to batch process patients in 3D Slicer
☆15Updated 7 months ago
Alternatives and similar repositories for SlicerCaseIterator
Users that are interested in SlicerCaseIterator are comparing it to the libraries listed below
Sorting:
- A project to provide custom sorting and renaming of dicom files☆78Updated last month
- Recipes for common medical image segmentation tasks using 3D Slicer☆56Updated 2 years ago
- Website for NA-MIC Project Weeks☆88Updated last week
- Python package to simplify access to the data available from NCI Imaging Data Commons☆15Updated 2 weeks ago
- Slicer extensions index☆73Updated this week
- DICOM RT-Struct to mask☆101Updated last year
- Python package for DICOM-SEG medical segmentation file reading and writing☆85Updated last year
- RadQy is a quality assurance and checking tool for quantitative assessment of magnetic resonance imaging (MRI) and computed tomography (C…☆99Updated 2 weeks ago
- Chest Imaging Platform (CIP)☆57Updated 3 weeks ago
- Software for automatic segmentation and generation of standardized clinical reports of brain tumors from MRI volumes☆39Updated last month
- Many additional segmentation tools for 3D Slicer's Segment Editor☆48Updated 5 months ago
- BOA is a segmentation tool of CT scans by the SHIP-AI group (https://ship-ai.ikim.nrw/). Combining the TotalSegmentator and the Body Comp…☆35Updated 8 months ago
- Extension for 3D Slicer containing various tools for module development and debugging☆30Updated 6 months ago
- Transparent and reproducible medical image processing pipelines in Python.☆47Updated this week
- This extension makes available Elastix medical image registration toolkit (http://elastix.isi.uu.nl/) available in Slicer.☆53Updated 4 months ago
- Computed tomography to body composition (Comp2Comp).☆86Updated 3 weeks ago
- TotalSegmentator packaged as an AIDE Application, based on the MONAI Application Package (MAP) standard.☆26Updated last year
- Example extension for 3D Slicer that demonstrates how to make a Python script available as a CLI module☆20Updated last year
- Materials for the yearly PerkLab bootcamp course☆93Updated 9 months ago
- Stores the MHub models dockerfiles and scripts.☆10Updated last month
- Very fast greedy diffeomorphic registration code☆77Updated 3 weeks ago
- Utilities for reading and writing files created by 3D Slicer☆39Updated 4 months ago
- Processing Library and Analysis Toolkit for Medical Imaging in Python☆132Updated last month
- Welcome to Nifti2Dicom! Born from countless hours of yelling at screens, this software aims to swap NIfTI for DICOM without inviting any …☆22Updated 8 months ago
- ☆105Updated 2 weeks ago
- Brain vessel segmentation using 3D convolutional neural networks☆43Updated 2 years ago
- Computational Environment for Radiological Research☆21Updated this week
- The easiest tool for experimenting with radiomics features.☆41Updated last year
- A 3D Slicer extension for efficient segmentation with nnInteractive.☆66Updated last week
- This extension contains only a module with some tools to install PyTorch inside Slicer, using the best possible version.☆35Updated last year