Alternatives and similar repositories for research

Users that are interested in research are comparing it to the libraries listed below

• slotThe / rq
  Functional command-line JSON processor with a bidirectional type system
  ☆25Updated 8 months ago
• jean-pierreBoth / probminhash
  Rust implementation of probminhash, superminhash and hyperloglog sketching algorithms
  ☆31Updated this week
• tfenne / pipebuffer
  A command line program for large scale buffering between piped programs
  ☆16Updated 4 years ago
• samuell / gccontent-benchmark
  Benchmarking different languages for a simple bioinformatics task (Counting the GC fraction of DNA in a FASTA file)
  ☆57Updated 2 years ago
• BioRadOpenSource / ish
  Alignment-based filtering CLI tool
  ☆60Updated 2 months ago
• vigna / sux-rs
  Rust implementations of succinct data structures
  ☆67Updated this week
• Daniel-Liu-c0deb0t / cute-nucleotides
  Cute tricks for SIMD vectorized binary encoding and decoding of nucleotides, in Rust.
  ☆129Updated 5 years ago
• Daniel-Liu-c0deb0t / simple-saca
  Hardware go brrr bounded context suffix array construction algorithm
  ☆19Updated 2 years ago
• TravisWheelerLab / sufr
  Parallel Construction of Suffix Arrays in Rust
  ☆26Updated 8 months ago
• rossanoventurini / qwt
  A Rust implementation of the Quad Wavelet Tree
  ☆49Updated this week
• jltsiren / simple-sds
  Simple succinct data structures (in Rust)
  ☆53Updated last month
• Cydhra / vers
  Succinct data structures using very efficient rank and select
  ☆128Updated last month
• dcjones / coitrees
  A very fast interval tree data structure
  ☆128Updated 11 months ago
• ashvardanian / StringWars
  Comparing performance-oriented string-processing libraries for substring search, multi-pattern matching, hashing, edit-distances, sketchi…
  ☆137Updated last week
• CarlKCarlK / range-set-blaze
  Integer sets as fast, sorted, integer ranges with full set operations
  ☆103Updated 3 months ago
• kampersanda / sucds
  Collection of succinct data structures in Rust
  ☆101Updated 5 months ago
• biointec / columba
  Fast Approximate Pattern Matching using Search Schemes
  ☆16Updated last week
• 10XGenomics / rust-boomphf
  Fast and scalable minimal perfect hashing for massive key sets
  ☆148Updated last year
• habedi / graphina
  A graph data science library for Rust 🦀 with Python bindings 🐍
  ☆100Updated this week
• CMU-SAFARI / Shifted-Hamming-Distance
  Source code for the Shifted Hamming Distance (SHD) filtering mechanism for sequence alignment. Described in the Bioinformatics journal pa…
  ☆36Updated 5 years ago
• mfontanini / trustrl
  CLI tool to manipulate URLs
  ☆15Updated 2 years ago
• RagnarGrootKoerkamp / PtrHash
  PtrHash minimal perfect hash function
  ☆88Updated 4 months ago
• fasterthanlime / stringsearch
  Collection of techniques for (binary) string searching
  ☆24Updated 6 years ago
• frjnn / bhtsne
  Parallel Barnes-Hut t-SNE implementation written in Rust.
  ☆89Updated 6 months ago
• wheretrue / exon
  Exon is an OLAP query engine specifically for biology and life science applications.
  ☆71Updated 10 months ago
• spiraldb / alp
  ALP floating point compression in Rust
  ☆49Updated this week
• gmarcais / compact_vector
  Bit packed vector of integral values
  ☆28Updated 11 months ago
• farhadi / atomic-cuckoo-filter
  A high-performance, lock-free concurrent cuckoo filter implementation in Rust
  ☆28Updated this week
• RUSH-LAB / RAMBO
  ☆20Updated 5 years ago
• attractivechaos / dlist
  Five implementations of double linked lists to demonstrate generic data structures in C
  ☆17Updated 6 years ago