RagnarGrootKoerkamp / researchLinks
Blog on postdoc @ KIT Karlsruhe
☆36Updated last week
Alternatives and similar repositories for research
Users that are interested in research are comparing it to the libraries listed below
Sorting:
- Functional command-line JSON processor with a bidirectional type system☆25Updated 8 months ago
- Rust implementation of probminhash, superminhash and hyperloglog sketching algorithms☆31Updated this week
- A command line program for large scale buffering between piped programs☆16Updated 4 years ago
- Benchmarking different languages for a simple bioinformatics task (Counting the GC fraction of DNA in a FASTA file)☆57Updated 2 years ago
- Alignment-based filtering CLI tool☆60Updated 2 months ago
- Rust implementations of succinct data structures☆67Updated this week
- Cute tricks for SIMD vectorized binary encoding and decoding of nucleotides, in Rust.☆129Updated 5 years ago
- Hardware go brrr bounded context suffix array construction algorithm☆19Updated 2 years ago
- Parallel Construction of Suffix Arrays in Rust☆26Updated 8 months ago
- A Rust implementation of the Quad Wavelet Tree☆49Updated this week
- Simple succinct data structures (in Rust)☆53Updated last month
- Succinct data structures using very efficient rank and select☆128Updated last month
- A very fast interval tree data structure☆128Updated 11 months ago
- Comparing performance-oriented string-processing libraries for substring search, multi-pattern matching, hashing, edit-distances, sketchi…☆137Updated last week
- Integer sets as fast, sorted, integer ranges with full set operations☆103Updated 3 months ago
- Collection of succinct data structures in Rust☆101Updated 5 months ago
- Fast Approximate Pattern Matching using Search Schemes☆16Updated last week
- Fast and scalable minimal perfect hashing for massive key sets☆148Updated last year
- A graph data science library for Rust 🦀 with Python bindings 🐍☆100Updated this week
- Source code for the Shifted Hamming Distance (SHD) filtering mechanism for sequence alignment. Described in the Bioinformatics journal pa…☆36Updated 5 years ago
- CLI tool to manipulate URLs☆15Updated 2 years ago
- PtrHash minimal perfect hash function☆88Updated 4 months ago
- Collection of techniques for (binary) string searching☆24Updated 6 years ago
- Parallel Barnes-Hut t-SNE implementation written in Rust.☆89Updated 6 months ago
- Exon is an OLAP query engine specifically for biology and life science applications.☆71Updated 10 months ago
- ALP floating point compression in Rust☆49Updated this week
- Bit packed vector of integral values☆28Updated 11 months ago
- A high-performance, lock-free concurrent cuckoo filter implementation in Rust☆28Updated this week
- ☆20Updated 5 years ago
- Five implementations of double linked lists to demonstrate generic data structures in C☆17Updated 6 years ago