B-field implementation in Rust
☆205Jun 24, 2025Updated 10 months ago
Alternatives and similar repositories for rust-bfield
Users that are interested in rust-bfield are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Shared k-mer content between two genomes☆19Jun 21, 2023Updated 2 years ago
- ☆21Feb 15, 2025Updated last year
- Compute a pairwise SNP distance matrix from one or two alignment(s)☆26Sep 12, 2024Updated last year
- Bloom filter implementation in Nimrod☆16May 26, 2023Updated 2 years ago
- What do you call a pointer we stole the high bits off? An ointer.☆94Dec 10, 2025Updated 5 months ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Python and Rust library for loading, saving, and manipulating taxonomic trees☆54Apr 14, 2026Updated last month
- Generate (message) sequence diagrams from TLA+ state traces☆74Feb 5, 2023Updated 3 years ago
- Fast and Memory Efficient Genome Sketching via HyperLogLog, HyperMinHash and UltraLogLog☆20Jan 22, 2026Updated 3 months ago
- A Rust-based library for phylogenetic analysis and manipulation☆20May 13, 2026Updated last week
- Succinct data structures using very efficient rank and select☆133Apr 17, 2026Updated last month
- Unsafely fast hashing algorithm 📈☆1,006Mar 4, 2026Updated 2 months ago
- LogLog space version of MinHash by combining ideas from HyperLogLog and b-bit MinHash☆57Feb 19, 2020Updated 6 years ago
- Compiler front-end foundation technology.☆481Feb 10, 2026Updated 3 months ago
- ☆21Dec 26, 2025Updated 4 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Basecalling configuration prediction through FASTQ files☆33Mar 17, 2026Updated 2 months ago
- ntHash implementation in Rust☆36Jul 12, 2024Updated last year
- Fast sequence distance estimates☆28May 13, 2026Updated last week
- Low latency inter-thread communication library in Rust inspired by the LMAX Disruptor.☆867May 10, 2026Updated last week
- Pairwise nucleotide alignment benchmark of Rust bindings☆31Jul 27, 2023Updated 2 years ago
- Wavefront alignment algorithm (WFA) in Golang☆31Jul 26, 2025Updated 9 months ago
- Simple succinct data structures (in Rust)☆55Apr 18, 2026Updated last month
- my personal blog by astro☆25Mar 26, 2025Updated last year
- Linear-time, low-memory construction of variation graphs☆20Feb 3, 2020Updated 6 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- 📖 🧬 SSHash is a compressed, associative, exact, and weighted dictionary for k-mers.☆100May 6, 2026Updated 2 weeks ago
- Given a set of kmers (fasta format) and a set of sequences (fasta format), this tool will extract the sequences containing the kmers.☆21Oct 20, 2023Updated 2 years ago
- Compute bottom-s sketches and s-buckets sketches, using simd-minimizers crate.☆21Dec 3, 2025Updated 5 months ago
- A FASTA/FASTQ format parser library☆20Mar 1, 2024Updated 2 years ago
- Minimum plain text representation of kmer sets☆18Jan 30, 2025Updated last year
- Bitpacked sequence trait and implementation☆18Feb 27, 2026Updated 2 months ago
- Kmer Analysis of Pileups for Genotyping☆39Mar 6, 2026Updated 2 months ago
- ☆11Dec 24, 2024Updated last year
- A small, auxiliary index to massively improve parallel fastq parsing☆32Mar 6, 2026Updated 2 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- PtrHash minimal perfect hash function☆95Sep 2, 2025Updated 8 months ago
- ☆14Jul 4, 2022Updated 3 years ago
- Rust port of Spice, a low-overhead parallelization library☆717May 5, 2025Updated last year
- PostgreSQL Prolog language handler☆134Apr 2, 2024Updated 2 years ago
- The fastest 128-bit and 256-bit hash, passes all tests, and under 140 source lines of code. API library and CLI tool in C++ and NodeJS/Wa…☆131Dec 20, 2025Updated 5 months ago
- Rust library for processing sequencing reads.☆25Sep 2, 2024Updated last year
- Sample an approximate number of reads from a fastq file without reading the entire file☆11Jun 20, 2017Updated 8 years ago