BD2KOnFHIR / fhirtordf
Python based FHIR to RDF conversion utility
☆15Updated 4 years ago
Alternatives and similar repositories for fhirtordf:
Users that are interested in fhirtordf are comparing it to the libraries listed below
- Sketching out an RDF representation for FHIR☆41Updated 2 months ago
- Computational LOINC in OWL.☆14Updated this week
- A python library for calculating semantic similarity between patients in N3C☆13Updated 2 years ago
- Web app and CLI tools for working with biomedical terminologies. https://github.com/orgs/jhu-bids/projects/9/views/7☆11Updated this week
- The official SNOMED CT OWL Toolkit. OWL conversion, classification and authoring support.☆101Updated 3 months ago
- Java library to map LOINC-encoded test results to Human Phenotype Ontology☆31Updated last year
- Medical action ontology☆55Updated 3 months ago
- Data transformation framework for LinkML data models☆52Updated last month
- A tutorial for the ROBOT command line tool.☆16Updated 2 years ago
- These python scripts connect to the Unified Medical Language System (UMLS) database and translate the ontologies into RDF/OWL files. This…☆86Updated 7 months ago
- Integrated OBO ontology store☆44Updated last month
- NLP2FHIR: A FHIR-based Clinical Data Normalization Pipeline and Its Applications☆60Updated 2 years ago
- FHIR to pandas dataframe for data analytics, AI and ML!☆34Updated 2 weeks ago
- Utility for working with DOSDP design patterns and OWL ontologies☆27Updated 9 months ago
- ☆25Updated 2 months ago
- A simple system for specifying OWL class design patterns for OBO-ish ontologies.☆44Updated 3 years ago
- Master Documentation Repository for OHNLP Projects Related to Coronavirus Disease 2019☆21Updated 2 years ago
- A Neo4j Plugin for Handling HL7 FHIR Data☆61Updated last year
- Simple Standard for Sharing Ontology Mappings☆162Updated last week
- Customizable translation of OBO graphs to dot for visualization using graphviz and other tools☆24Updated 2 months ago
- CRDC-H model in LinkML, developed by the Center for Cancer Data Harmonization (CCDH)☆16Updated 3 years ago
- Data Ingestion and Harmonization☆43Updated 2 years ago
- ☆13Updated last week
- loinc2hpo Annotation Data☆24Updated 2 years ago
- FHIR Storage, Query & Analytics Track☆19Updated 6 years ago
- ☆10Updated this week
- OMOP2OBO: A Python Library for mapping OMOP standardized clinical terminologies to Open Biomedical Ontologies☆87Updated last year
- Tools for working with KGCL☆17Updated 5 months ago
- Runs CQL phenotype definitions against an OMOP repository☆12Updated 2 years ago
- Version 4 of the EMBL-EBI Ontology Lookup Service (OLS)☆62Updated this week