mariomulansky / PySpike
Python implementation of spike distance metrics
☆73Updated 8 months ago
Alternatives and similar repositories for PySpike:
Users that are interested in PySpike are comparing it to the libraries listed below
- Fitting and simulation of Poisson generalized linear model for single and multi-neuron spike trains (Pillow et al 2008).☆38Updated 5 years ago
- Simple tutorial on Gaussian and Poisson GLMs for single and multi-neuron spike train data☆94Updated 2 years ago
- Tools for spike data analysis and visualization☆104Updated 2 years ago
- Neural Spike Train Analysis Toolbox for Matlab☆34Updated 7 years ago
- Neuroelectrophysiology object model and data analysis in Python.☆51Updated last month
- MountainLab is data processing, sharing and visualization software for scientists. It is built around MountainSort, spike sorting softwar…☆44Updated 6 years ago
- Elephant is the Electrophysiology Analysis Toolkit☆210Updated last month
- Fast and customizable of extracellular recordings on MEA☆43Updated last week
- Model fitting toolbox for the Brian 2 simulator☆15Updated last year
- Fitting and analysis of trial-based neural spike responses with Generalized Linear Model (GLM).☆69Updated 4 years ago
- Python tools for analysis of neurophysiology data☆37Updated last year
- Fast and scalable spike sorting in python☆89Updated last year
- Code accompanying Steinmetz et al., 2019☆59Updated 3 years ago
- A class for using ML algorithms for spike prediction☆60Updated 7 years ago
- A Matlab interface for reading and writing NWB files☆52Updated this week
- YASS: Yet Another Spike Sorter☆66Updated 2 years ago
- non-parametric inference for convolutional filters in poisson glms☆13Updated 3 years ago
- NeuroTools is a collection of tools for representing and anlyzing neuroscientific data.☆32Updated 5 years ago
- Automatic spike sorting, cluster visualization, spike sorting GUIs☆44Updated last year
- Automatic spike sorting up to 64 channels☆53Updated 4 years ago
- Modules for processing extracellular electrophysiology data from Neuropixels probes☆114Updated 8 months ago
- Code and data for the book "Case Studies in Neural Data Analysis"☆36Updated 7 years ago
- Python-module for calculation of extracellular potentials from multicompartment neuron models and networks☆79Updated 3 months ago
- Code for "Cortical areas interact through a communication subspace", Semedo et al. (Neuron, 2019)☆46Updated 5 years ago
- Open-source, graph-based Python code generator and analysis toolbox for dynamical systems (pre-implemented and custom models). Most pre-i…☆79Updated 8 months ago
- WIP: Python port of Kilosort2☆51Updated last year
- cli for downloading data from crcns.org☆31Updated last year
- Preferential Subspace Identification Algorithm☆52Updated 6 months ago
- Pytorch implementation of LocaNMF☆35Updated 5 years ago
- ☆13Updated 5 years ago