The BRC Pipeline scripts are being released for processing magnetic resonance imaging (MRI) data. This processing pipeline could be applied to different modalities such as T1w/T2w MRI, diffusion MRI, and functional MRI datasets.
☆19Aug 7, 2026Updated 3 months ago
Alternatives and similar repositories for BRC_Pipeline
Users that are interested in BRC_Pipeline are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- An analysis tool that uses per-voxel statistical maps in conjunction with FSL atlases to create per-region statistical maps. Current usag…☆13May 2, 2024Updated 2 years ago
- (version 2018) Toolbox for estimation and interpretation of whole-brain linear effective connectivity☆10Nov 8, 2019Updated 6 years ago
- Diffuse Cluster Estimation and Regression. A de-noising tool.☆20Aug 22, 2022Updated 4 years ago
- Python package for analysing and visualising brain connectome data☆11May 16, 2024Updated 2 years ago
- NeUroGlancer Ground Truth - annotate cell centers☆11Dec 15, 2023Updated 2 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- These Python notebooks reproduce some figures in the following preprint using the libraries pyMOU and NetDynFlow: https://www.biorxiv.org…☆12Feb 28, 2023Updated 3 years ago
- A tool for reorienting and cropping MRI data☆10Jan 27, 2026Updated 9 months ago
- Open-source python package for the extraction of Radiomics features from 2D and 3D images and binary masks. Support: https://discourse.sl…☆13Oct 1, 2025Updated last year
- Neuroimgaing data processing pipelines used in the lab☆21Jul 23, 2019Updated 7 years ago
- precon_all surface pipline☆35Aug 12, 2026Updated 2 months ago
- Bootstrapped Analysis of Stable Clusters- A semi-automated fMRI individual and group level functional parcellation technique☆26Oct 11, 2019Updated 7 years ago
- Image mapping using the LDDMM algorithm, implemented in tensorflow☆17Aug 18, 2021Updated 5 years ago
- A really simple tool to visualize different segmentation results☆19Sep 2, 2026Updated 2 months ago
- Optimized cerebral cortical surface mapping of neurite properties using diffsion magnetic resonace imaging (dMRI)☆16Oct 22, 2026Updated 2 weeks ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆17Aug 16, 2024Updated 2 years ago
- hese scripts aim at computing the effective connectivity by using functional and structural MRI data, as in A.Crimi et al. "Effective Bra…☆21Sep 24, 2021Updated 5 years ago
- Easy creation of Lausanne2008 atlases☆23May 28, 2020Updated 6 years ago
- An ETL pipeline to transform your EMP data to OMOP.☆19Oct 15, 2025Updated last year
- GPU-accelerated Python library for calculating radiomics features from medical images☆19Oct 19, 2026Updated 2 weeks ago
- An MDP solver for Pacman to win games. Base game from Berkeley cs188x☆10Jan 23, 2018Updated 8 years ago
- BRAinNetome fMRI Toolkit -- MATLAB scripts/GUIs for fMRI data pre-/post-processes☆15Oct 12, 2020Updated 6 years ago
- Ready-to-use LaTeX template with VS Code setup for local compilation (Linux, Windows, macOS)☆24Aug 15, 2026Updated 2 months ago
- ☆18Feb 6, 2026Updated 9 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Creating an Apple Silicon version of PsychoPy☆18May 4, 2026Updated 6 months ago
- Process images using SimpleITK in napari☆23May 1, 2025Updated last year
- Self-Tuning Optimized Kalman Filtering (STOK) + DyNet simulation + connectivity metrics☆13May 10, 2021Updated 5 years ago
- PET Unified Pipeline☆25Oct 13, 2020Updated 6 years ago
- A package to study complex networks based on the temporal evolution of their Dynamic Communicability and Flow.☆11Jan 30, 2026Updated 9 months ago
- Galaxy Image Analysis is an ELIXIR Service for computer-based image analysis in Galaxy.☆23Oct 11, 2026Updated 3 weeks ago
- Villeneuve Laboratory PET Pipeline☆10Apr 29, 2026Updated 6 months ago
- Tractome is an interactive 3D tool for exploration and segmentation of tractography data.☆12Updated this week
- Gray-matter Based Spatial Statistics☆23Apr 19, 2023Updated 3 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Connectome Mapper☆39Jan 5, 2022Updated 4 years ago
- Docker Image with Matlab Compiler Runtime and SSHD☆15Aug 28, 2014Updated 12 years ago
- SDF grammar for Fortran 2008 with constructors for AST☆23Jan 23, 2019Updated 7 years ago
- Exact geodesic for triangular meshes implemented by Danil Kirsanov☆25Apr 30, 2022Updated 4 years ago
- The NiPreps' Reporting and Visualization system - report templates and "reportlets"☆13Updated this week
- Synergistic information via data disclosure.☆11Mar 29, 2024Updated 2 years ago
- Some WholeBrain simulation tests, for now...☆14Aug 25, 2025Updated last year