SPMIC-UoN / BRC_PipelineLinks
The BRC Pipeline scripts are being released for processing magnetic resonance imaging (MRI) data. This processing pipeline could be applied to different modalities such as T1w/T2w MRI, diffusion MRI, and functional MRI datasets.
☆17Updated 4 months ago
Alternatives and similar repositories for BRC_Pipeline
Users that are interested in BRC_Pipeline are comparing it to the libraries listed below
Sorting:
- Jupyter notebooks for analyzing diffusion MRI data in order to calculate DTI, DKI, NODDI, SS3T-CSD, and MSMT-CSD modelled parametric maps☆14Updated 2 years ago
- Automated subdivision of white matter hyperintensities☆12Updated 3 years ago
- MAGIC: Multi-scAle heteroGeneity analysIs and Clustering☆14Updated last year
- Repository for the Brainhack School 2020 team working with fMRI and ABIDE data to train machine learning models.☆44Updated last year
- ASL pipeline for the Human Connectome Project☆12Updated 2 months ago
- Neuroimaging based brain age prediction using 3D Dense-net☆19Updated 3 years ago
- Automatic BIDS architecture☆15Updated last year
- a tool to segment the hypothalamus and associated subunits on T1-weighted MRI scans☆25Updated 2 years ago
- DeepPrep: An accelerated, scalable, and robust pipeline for neuroimaging preprocessing empowered by deep learning☆106Updated 2 months ago
- Preprocessing of arterial spin labeling (ASL) data☆53Updated 2 weeks ago
- Do not use this old repository. Instead, use https://github.com/pnlbwh/luigi-pnlpipe & https://github.com/pnlbwh/pnlNipype☆12Updated 9 months ago
- ☆13Updated 2 years ago
- Convolutional Neural Network trained for age prediction using a large (n=11,729) set of MRI scans from a highly diversified cohort spanni…☆57Updated 5 years ago
- ☆34Updated 2 years ago
- Gray-matter Based Spatial Statistics☆23Updated 2 years ago
- A workflow to allow Freesurfer recon-all to run on brain image with gliomas☆32Updated last year
- CIVET Installer☆30Updated 3 years ago
- iBEAT V2.0 Docker☆14Updated 7 months ago
- WM tract atlases for the human (HCP and UK Biobank) and Macaque brain and connectivity blueprint atlases for the human (HCP) and macaque …☆18Updated 4 years ago
- Brain decoding using graph convolutional network on fMRI time-series☆40Updated 5 years ago
- Code and trained weights for upcoming paper "A U-NET model for Local Brain-Age"☆16Updated 4 years ago
- Easylearn is designed for machine learning mainly in resting-state fMRI, radiomics and other fields (such as EEG). Easylearn is built on …☆38Updated 2 years ago
- AICONSlab's white matter hyperintensities (WMH) segmentation algorithm using CNNs☆20Updated last year
- Temporal Stability of Modular Brain Network Organization - and its Relationship with Individual Differences (e.g., in General Intelligen…☆12Updated 6 years ago
- A suite of brain PET processing pipelines☆14Updated 11 months ago
- BrainSurfCNN for individualized prediction of task contrasts from resting-state functional connectivity☆28Updated 3 years ago
- structural analysis of neonatal brain MRI scans☆59Updated 4 years ago
- PET2BIDS helps you convert your PET data into BIDS! raw PET scanner files (e.g. ecat, dicom) and additional side files like .e.g excel sh…☆31Updated last month
- Ironsmith is a comprehensive, fully automated pipeline for creating and processing Quantitative Susceptibility Maps (QSM), extracting QSM…☆25Updated 2 years ago
- A radiomics tool with a variety of brain MRI processing functions, including affine registration, hippocampus segmentation and feature ca…☆29Updated 4 years ago