MaayanLab / clustergrammer-web
Create a clustergram visualization from a user defined network in tsv format.
☆13Updated 2 years ago
Alternatives and similar repositories for clustergrammer-web
Users that are interested in clustergrammer-web are comparing it to the libraries listed below
Sorting:
- Find nodes in hierarchical clustering that are statistically significant☆28Updated 7 years ago
- Single Cell Multiplexed Imaging Jupyter Voila Dashboard using CODEX Data☆17Updated last year
- Javascript library for visualizing genomics data with D3.☆19Updated 8 years ago
- Monet: An open-source Python package for analyzing scRNA-Seq data using PCA-based latent spaces☆39Updated 3 years ago
- A python module for the clustergrammer matrix visualization project that creates the JSON object for the front-end JavaScript portion of …☆12Updated 4 years ago
- Robust and scalable inference of cell lineages via consensus clustering. Features novel algorithms for the comparison of weighted graphs …☆14Updated 8 years ago
- A web app for exploratory data analysis of high-throughput screens (HTS)☆17Updated 6 years ago
- qtools has helper functions to submit jobs to compute clusters (PBS on TSCC, SGE on oolite) from within Python☆21Updated last year
- Data Integration tool utilizing network information for predictive analyses☆16Updated 2 years ago
- ☆11Updated 7 years ago
- Compute a 2D embedding of a data matrix given supervised class information.☆12Updated 5 years ago
- IPython notebooks to teach Genomics and Population Genetics☆21Updated 8 years ago
- Framework for running text mining tools on latest publications. Main page at:☆14Updated 2 years ago
- ☆12Updated 6 years ago
- Platform for integrating genomic analysis with Jupyter Notebooks.☆44Updated 9 months ago
- Visual exploration of large genome interaction matrices with interactive small multiples.☆13Updated 3 years ago
- python script to programmatically enrich your data using Enrichr API☆12Updated 7 years ago
- netSmooth: A Network smoothing based method for Single Cell RNA-seq imputation☆27Updated last year
- Home of the Genomic Feature and Variation Ontology (GFVO)☆16Updated 4 years ago
- Pathway visualization and analysis tool for Pathway Commons and other BioPAX data☆13Updated 2 years ago
- A repository housing metadata and data files (or links to data files) that are being prepared as sample data bundles for various uses.☆13Updated 3 years ago
- An interactive and explorative visualization tool in D3 based on hive plots built for complex networks.☆9Updated 4 years ago
- The Clustergrammer interactive Jupyter notebook widget☆47Updated 2 years ago
- Literature mining for T cell relations☆23Updated 2 years ago
- Base-pair resolution detection of transcription factor binding site by deep deconvolutional network☆10Updated 7 years ago
- Reproducible drug repurposing: a Python-based framework for building drug-disease association classifiers☆15Updated 7 years ago
- Tutorials for the InterMine Python web client☆14Updated 2 years ago
- Recommendations to contenarized your bioinformatics software☆11Updated 6 years ago
- Comparison of RNA-seq time course differential expression analysis tools☆12Updated 7 years ago
- MuSiCa - Mutational Signatures in Cancer☆23Updated last year