☆71Nov 9, 2025Updated 9 months ago
Alternatives and similar repositories for Minimal_Cell_4DWCM
Users that are interested in Minimal_Cell_4DWCM are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆44Jul 8, 2025Updated last year
- a package to simulate fluid surfaces and biomembranes☆41Jul 9, 2026Updated last month
- Implementation of corrections for diffusion coefficients in membrane simulations.☆10Aug 2, 2022Updated 4 years ago
- ☆13Jul 15, 2024Updated 2 years ago
- This script makes a cyclic peptide or cyclic nucleotide topology file for GROMACS out of (specially prepared) linear molecule topology fi…☆15Nov 24, 2020Updated 5 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- An efficient method for the conversion from internal to Cartesian coordinates that utilizes the platform-agnostic JAX Python library.☆21Jun 12, 2024Updated 2 years ago
- Benchmarking tools and analysis scripts for processing and evaluating structural data from the OpenBind EV-A71 2A dataset☆51Updated this week
- Robotics Section: A procedural python-based task execution framework with ROS integration.☆11May 23, 2025Updated last year
- Virtual Cell Framework☆135Updated this week
- ☆12Jul 21, 2024Updated 2 years ago
- ☆27Jan 20, 2022Updated 4 years ago
- ☆14Jun 4, 2024Updated 2 years ago
- INSert membrANE - A simple, versatile tool for building coarse-grained simulation systems☆92Apr 19, 2026Updated 3 months ago
- An IPython/Jupyter widget for interactive molecular visualization, based on Molstar. This is the Jupyter widget version of nano-protein-…☆46Nov 4, 2025Updated 9 months ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- ☆51Jun 17, 2026Updated last month
- Repo for the publication titled: "Key Interaction Networks: Identifying Evolutionarily Conserved Non-Covalent Interaction Networks Across…☆18Nov 14, 2023Updated 2 years ago
- Main code repository for FATSLiM☆23Feb 13, 2022Updated 4 years ago
- [Briefings in Bioinformatics'20] Integrating multi-network topology for gene function prediction using deep neural networks☆14Sep 5, 2019Updated 6 years ago
- Codebase of the paper "Aligning Protein Conformation Ensemble Generation with Physical Feedback" (ICML 2025)☆18Jul 6, 2025Updated last year
- Rapid Generation of Rare Event Pathways Using Direction Guided Adaptive Sampling: From Ligand Unbinding to Protein (Un)Folding☆38Aug 2, 2026Updated last week
- 3D segmentation for cells and organoids of 3D multichannel images☆34Jun 23, 2026Updated last month
- How to get started with computational chemistry research. Directed to new people in our lab, may be useful in general.☆33Jun 4, 2018Updated 8 years ago
- ☆19Jun 11, 2026Updated 2 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- 3D Extension of the Cellpose Algorithm by Stringer et al., 2021.☆37Oct 10, 2022Updated 3 years ago
- ☆23Sep 14, 2023Updated 2 years ago
- Using supervised machine learning to build collective variables for accelerated sampling☆28Jun 26, 2018Updated 8 years ago
- 1140 Dandisets, 965.1 TB total. DataLad super-dataset of all Dandisets from https://github.com/dandisets☆14May 28, 2026Updated 2 months ago
- Example files for Colvars module: https://github.com/Colvars/colvars☆14Dec 7, 2021Updated 4 years ago
- 🦜 DISCOTRESS 🦜 is a software package to simulate and analyse the dynamics on arbitrary Markov chains☆27Jul 29, 2021Updated 5 years ago
- Peptide2Mol: A Diffusion Model for Generating Small Molecules as Peptide Mimics for Targeted Protein Binding☆20Jul 7, 2026Updated last month
- 🔬Multi-defect microscopy image restoration under limited data conditions☆18Nov 20, 2022Updated 3 years ago
- Metalign: efficient alignment-based metagenomic profiling via containment min hash☆32Sep 12, 2023Updated 2 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ProteinGPT: Multimodal LLM for Protein Property Prediction and Structure Understanding☆34Apr 12, 2025Updated last year
- ☆31Aug 16, 2025Updated 11 months ago
- ☆49Jul 14, 2026Updated last month
- CIFcurator helps create a curated ensemble of molecular structures☆19Updated this week
- ☆18Nov 17, 2025Updated 8 months ago
- Deterministic particle dynamics for simulating Fokker-Planck probability flows☆26Mar 7, 2023Updated 3 years ago
- Scripts for PCA and related analyses of lipid motions☆10Jun 21, 2022Updated 4 years ago