INSert membrANE - A simple, versatile tool for building coarse-grained simulation systems
☆96Oct 1, 2026Updated 2 weeks ago
Alternatives and similar repositories for Insane
Users that are interested in Insane are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Mapping from Coarse Grain Models to Atomistic (and Back)☆22Sep 27, 2023Updated 3 years ago
- Describe and apply transformation on molecular structures and topologies☆151Oct 2, 2026Updated 2 weeks ago
- Coarse-grained mapping and parametrisation for the Martini 3 forcefield☆23Jul 20, 2026Updated 2 months ago
- ☆21Feb 6, 2017Updated 9 years ago
- ☆28Jan 20, 2022Updated 4 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A Python toolkit for the analyis of lipid membrane simulations☆37Jun 20, 2026Updated 3 months ago
- COBY (Coarse Grained System Builder) can be used to create coarse-grained systems in Martini 3☆54Sep 17, 2026Updated last month
- MDAnalysis tool to calculate membrane curvature.☆37Oct 10, 2026Updated last week
- Create coarse grain Martini input files for Gromacs from (atomistic) pdb files.☆39Nov 2, 2022Updated 3 years ago
- Home of the public Martini 3 lipid parameters☆29Sep 29, 2025Updated last year
- Main code repository for FATSLiM☆23Feb 13, 2022Updated 4 years ago
- Automatic MARTINI parametrization of small organic molecules☆76May 28, 2025Updated last year
- Generate input parameters and coordinates for atomistic and coarse-grained simulations of polymers, ssDNA, and carbohydrates☆201Sep 29, 2026Updated 2 weeks ago
- ☆53Jun 17, 2026Updated 4 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Generate coarse-grained molecular dynamics models from atomistic trajectories.☆69Aug 2, 2026Updated 2 months ago
- Build coarse-grained mapping for molecules from a web-GUI☆20Sep 10, 2021Updated 5 years ago
- Martini 3 small molecule database☆73May 13, 2026Updated 5 months ago
- Toolkit for free-energy calculation setup/analysis and biomolecular structure handling☆182Jul 28, 2026Updated 2 months ago
- Perform polymerization and crosslinking in MARTINI coarse-grained forcefield using GROMACS MD package☆31Jan 21, 2026Updated 8 months ago
- Map atomistic trajectories to CG Martini level fast and compute interactions☆17Updated this week
- Collection of interaction and molecule parameters for the Martini3 force-field☆24Feb 7, 2023Updated 3 years ago
- Toolkit to aid in the analysis of lipid bilayer molecular simulation trajectories.☆26May 12, 2021Updated 5 years ago
- Automatic Martini force field generator for small organic molecules (up to 25 heavy atoms), Martini 3 compatible☆39Oct 1, 2026Updated 2 weeks ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Some of useful tcl scripts to analyse data from VMD☆16Aug 2, 2022Updated 4 years ago
- A tool for visualizing Martini force field simulations in VMD☆28May 11, 2026Updated 5 months ago
- Example files for Colvars module: https://github.com/Colvars/colvars☆14Dec 7, 2021Updated 4 years ago
- Generates Martini models for open carbon nanotubes to use with Gromacs.☆15Nov 24, 2021Updated 4 years ago
- LOOS: a lightweight object-oriented structure analysis library☆130Jul 9, 2026Updated 3 months ago
- ☆67Dec 10, 2025Updated 10 months ago
- A python toolkit for analysing membrane protein-lipid interactions.☆73Mar 30, 2026Updated 6 months ago
- Conversion of coarsegrain to atomistic (complete rewrite of the original CG2AT)☆39Jul 17, 2024Updated 2 years ago
- A voxel based approach for dynamic cluster analysis of molecular dynamics trajectories.☆34Nov 5, 2025Updated 11 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Toolkit for free-energy calculation setup/analysis and biomolecular structure handling☆69Apr 16, 2021Updated 5 years ago
- Spectral Gap Optimization of Parameters☆18Mar 28, 2020Updated 6 years ago
- a package to simulate fluid surfaces and biomembranes☆42Sep 27, 2026Updated 3 weeks ago
- Martini 3 Building Blocks for Lipid Nanoparticle Design☆28Mar 18, 2026Updated 7 months ago
- Algorithm for identifying hydrogen bond networks in CG proteins to implement Go-like Martini 3 models☆17Oct 25, 2024Updated last year
- A library for converting molecular topologies☆13May 20, 2015Updated 11 years ago
- Swarm-CG: Automatic Parametrization of Bonded Terms in MARTINI-based Coarse-Grained Models of Simple to Complex Molecules via Fuzzy Self-…☆49Aug 19, 2024Updated 2 years ago