Image-Py / sknwLinks
build net work from skeleton image (2D-3D)
☆242Updated 3 years ago
Alternatives and similar repositories for sknw
Users that are interested in sknw are comparing it to the libraries listed below
Sorting:
- Python module to analyse skeleton (thin object) images☆128Updated 3 weeks ago
- Image segmentation - general superpixel segmentation & center detection & region growing☆380Updated 3 years ago
- Connected components on discrete and continuous multilabel 3D & 2D images. Handles 26, 18, and 6 connected variants; periodic boundaries …☆422Updated 2 weeks ago
- Fast computation of Hausdorff distance in Python☆256Updated 4 years ago
- Skeletonize densely labeled 3D image segmentations with TEASAR. (Medial Axis Transform)☆161Updated 2 weeks ago
- Dijkstra's Shortest Path for 6, 18, and 26-Connected 3D (Volumetric) Image Volumes☆82Updated 6 months ago
- Euclidean distance & signed distance transform for multi-label 3D anisotropic images using marching parabolas.☆254Updated 5 months ago
- The mutex watershed for image segmentation.☆67Updated 4 years ago
- Morphological snakes for image segmentation and tracking☆639Updated 2 years ago
- Using a U-Net for image segmentation, blending predicted patches smoothly is a must to please the human eye.☆372Updated 5 years ago
- Morphological snakes for image segmentation and tracking☆16Updated 6 years ago
- A library that helps you split image into small, overlappable patches, and merge patches into original image.☆225Updated last year
- Image registration using pytorch☆183Updated last year
- geodesic distance transform of 2d/3d images☆134Updated 2 years ago
- Thin wrapper around elastix - a toolbox for rigid and nonrigid registration of images☆108Updated 5 years ago
- Differentiable elastic deformations for N-dimensional images (Python, SciPy, NumPy, TensorFlow, PyTorch).☆190Updated 5 months ago
- Library for 3D augmentations☆252Updated 9 months ago
- This repository implements skeleton matching algorithm.☆50Updated 4 years ago
- Code for the NeurIPS 2019 paper: Topology-Preserving Deep Image Segmentation☆168Updated last year
- Chan-Vese level-sets in Python☆95Updated 4 years ago
- 3D graph cut segmentation☆89Updated 3 years ago
- Python implementation of discrete skeleton evolution☆18Updated last year
- A unified environment for DNN-based automated segmentation of neuronal EM images☆37Updated 11 months ago
- A PyTorch-based library for working with 3D and 2D convolutional neural networks, with focus on semantic segmentation of volumetric biome…☆168Updated last year
- An elegant Python interface for visualization on the web platform to interactively generate insights into multidimensional images, point …☆611Updated 4 months ago
- Simple pure-python module for reading and writing nrrd files.☆122Updated 6 months ago
- Biological Engineering Test Code for Worm Analysis: https://stackoverflow.com/q/37820629/293195☆40Updated 7 years ago
- Python modules to work with large multiresolution images.☆211Updated this week
- Image registration laboratory for 2D and 3D image data☆429Updated 4 years ago
- Nonrigid image registration using multi-scale 3D convolutional neural networks☆198Updated last year