gvtulder / elasticdeformLinks
Differentiable elastic deformations for N-dimensional images (Python, SciPy, NumPy, TensorFlow, PyTorch).
☆193Updated 9 months ago
Alternatives and similar repositories for elasticdeform
Users that are interested in elasticdeform are comparing it to the libraries listed below
Sorting:
- A PyTorch-based library for working with 3D and 2D convolutional neural networks, with focus on semantic segmentation of volumetric biome…☆169Updated 2 years ago
- A Python package for geometric transformations of images for data augmentation in deep learning☆69Updated 6 years ago
- matlab and python wrap of crf and dense crf, both 2d and 3d are supported☆170Updated 3 years ago
- Multi-Planar UNet for autonomous segmentation of 3D medical images☆196Updated 2 years ago
- ☆171Updated 4 years ago
- [IEEE JBHI'21] Reinventing 2D Convolutions for 3D Images - 1 line of code to convert pretrained 2D models to 3D!☆170Updated last year
- an image registration/augmentation/segmentation package☆174Updated 2 years ago
- How Distance Transform Maps Boost Segmentation CNNs: An Empirical Study☆394Updated 4 years ago
- ☆195Updated 5 years ago
- A tool to do quick and dirty inspection of multichannel 3D data. I use it mainly to visualize batches for deep learning.☆52Updated 10 months ago
- This repository holds the code framework used in the paper Reg R-CNN: Lesion Detection and Grading under Noisy Labels. It is a fork of MI…☆52Updated 3 years ago
- Nonrigid image registration using multi-scale 3D convolutional neural networks☆200Updated last year
- 3D volume data augmentation package inspired by albumentations☆81Updated 5 years ago
- PyTorch implementation of HighRes3DNet☆55Updated 4 months ago
- Library to compute surface distance based performance metrics for segmentation tasks.☆584Updated 9 months ago
- Image-and-Spatial Transformer Networks☆112Updated 2 years ago
- The implementation of 3D-UNet using PyTorch☆101Updated 9 months ago
- Thin wrapper around elastix - a toolbox for rigid and nonrigid registration of images☆110Updated 5 years ago
- Image registration using pytorch☆184Updated last year
- Image registration laboratory for 2D and 3D image data☆430Updated 5 years ago
- Tensorflow Code for "PHiSeg: Capturing Uncertainty in Medical Image Segmentation", Proc. MICCAI 2019☆129Updated 3 years ago
- Skull stripping and brain tissue segmentation☆121Updated 6 years ago
- Dataset of head and neck CT scans and segmentations in NRRD format.☆99Updated 5 years ago
- (This repo is no longer up-to-date. Any updates will be at https://github.com/DeepRegNet/DeepReg/) A demo of the re-factored label-driven…☆124Updated 6 years ago
- This repository implements pytorch version of the modifed 3D U-Net from Fabian Isensee et al. participating in BraTS2017☆222Updated 7 years ago
- Library for 3D augmentations☆258Updated last year
- geodesic distance transform of 2d/3d images☆136Updated 2 years ago
- "pip install unet": PyTorch Implementation of 1D, 2D and 3D U-Net architecture.☆182Updated 11 months ago
- An example project of how to use a U-Net for segmentation on medical images with PyTorch.☆149Updated last year
- ☆191Updated 3 years ago