gabyx / WormAnalysisLinks
Biological Engineering Test Code for Worm Analysis: https://stackoverflow.com/q/37820629/293195
☆40Updated 7 years ago
Alternatives and similar repositories for WormAnalysis
Users that are interested in WormAnalysis are comparing it to the libraries listed below
Sorting:
- Dijkstra's Shortest Path for 6, 18, and 26-Connected 3D (Volumetric) Image Volumes☆81Updated 5 months ago
- Python implementation of discrete skeleton evolution☆18Updated last year
- Python module to analyse skeleton (thin object) images☆126Updated 3 weeks ago
- Extension to import microCT data and conduct 3D morphometrics in Slicer☆106Updated this week
- ☆34Updated 5 years ago
- A Python package for geometric transformations of images for data augmentation in deep learning☆67Updated 5 years ago
- Skeletonize densely labeled 3D image segmentations with TEASAR. (Medial Axis Transform)☆157Updated 2 weeks ago
- A 3D level set method, based on a paper for X-Ray CT segmentation of root systems in WACV 2018.☆25Updated 5 years ago
- ☆25Updated 6 years ago
- Implementation of our MICCAI and invited IJCARS paper on detecting anatomical landmarks of the pelvis in X-ray images from arbitrary view…☆17Updated 5 years ago
- build net work from skeleton image (2D-3D)☆240Updated 3 years ago
- 2d and 3d distance transform based skeletonization☆22Updated last year
- Mirorr: Multimodal Image Registration using blOck-matching and Robust Regression☆28Updated 4 years ago
- This repository implements skeleton matching algorithm.☆49Updated 4 years ago
- geodesic distance transform of 2d/3d images☆134Updated last year
- Python generator for voxel data augmentation☆23Updated 6 years ago
- Algorithms for 2D/3D image registration☆30Updated 10 years ago
- ☆31Updated 4 years ago
- calculate mutual information and mattes mutual information in CUDA☆19Updated 7 years ago
- A loss function (Weighted Hausdorff Distance) for object localization in PyTorch☆91Updated 6 years ago
- Official SuperElastix repository☆87Updated 6 years ago
- 3D graph cut segmentation☆89Updated 3 years ago
- The Biomedical Image Segmentation App is a free and open-source application for segmenting 3D images such as CT and MRI scans, developed …☆53Updated last month
- simple-centerline-extraction☆18Updated last month
- Euclidean distance & signed distance transform for multi-label 3D anisotropic images using marching parabolas.☆251Updated 3 months ago
- Fast anisotropic diffusion filter (2D and 3D)☆26Updated 2 years ago
- Image segmentation - general superpixel segmentation & center detection & region growing☆379Updated 3 years ago
- C++ implementation of vesselness measure (or vesselness filter). Both CPU and GPU version are available.☆43Updated 7 years ago
- Fit a set of 3D points to a cylinder surface.☆53Updated last year
- An implementation of morphological contour interpolation☆33Updated last week