Alternatives and similar repositories for WormAnalysis

Users that are interested in WormAnalysis are comparing it to the libraries listed below

• Image-Py / sknw
  build net work from skeleton image (2D-3D)
  ☆246Updated 3 years ago
• seung-lab / dijkstra3d
  Dijkstra's Shortest Path for 6, 18, and 26-Connected 3D (Volumetric) Image Volumes
  ☆83Updated 9 months ago
• seung-lab / euclidean-distance-transform-3d
  Euclidean distance & signed distance transform for multi-label 3D anisotropic images using marching parabolas.
  ☆256Updated 7 months ago
• taigw / GeodisTK
  geodesic distance transform of 2d/3d images
  ☆136Updated 2 years ago
• jni / skan
  Python module to analyse skeleton (thin object) images
  ☆135Updated last week
• seung-lab / connected-components-3d
  Connected components on discrete and continuous multilabel 3D & 2D images. Handles 26, 18, and 6 connected variants; periodic boundaries …
  ☆427Updated last week
• CBICA / Tutorials
  Here, we will be showcasing our seminar series “CPP for Image Processing and Machine Learning” including presentations and code examples.…
  ☆57Updated 4 years ago
• seung-lab / kimimaro
  Skeletonize densely labeled 3D image segmentations with TEASAR. (Medial Axis Transform)
  ☆170Updated last week
• originlake / DSE-skeleton-pruning
  Python implementation of discrete skeleton evolution
  ☆20Updated 2 years ago
• mjirik / imcut
  3D graph cut segmentation
  ☆89Updated 4 years ago
• yzhong52 / ThinVesselSegmentation
  C++ implementation of vesselness measure (or vesselness filter). Both CPU and GPU version are available.
  ☆43Updated 7 years ago
• aAbdz / skeletonize
  2d and 3d distance transform based skeletonization
  ☆22Updated last year
• SuperElastix / SuperElastix
  Official SuperElastix repository
  ☆87Updated 6 years ago
• mwagner9 / BEGPUThinning
  ☆32Updated 5 years ago
• phi-max / skeleton3d-matlab
  MATLAB code to calculate the 3D skeleton of a binary volume using parallel medial axis thinning
  ☆47Updated 6 years ago
• kevin-keraudren / chanvese
  Chan-Vese level-sets in Python
  ☆93Updated 4 years ago
• amy-tabb / tabb-level-set-segmentation
  A 3D level set method, based on a paper for X-Ray CT segmentation of root systems in WACV 2018.
  ☆25Updated 6 years ago
• path-openings / RORPO
  Ranking Operator Response of Path Openings
  ☆29Updated last year
• mavillan / py-hausdorff
  Fast computation of Hausdorff distance in Python
  ☆259Updated 4 years ago
• tueimage / gryds
  A Python package for geometric transformations of images for data augmentation in deep learning
  ☆68Updated 6 years ago
• mmkamani7 / SkeletonMatching
  This repository implements skeleton matching algorithm.
  ☆50Updated 4 years ago
• InsightSoftwareConsortium / ITKThickness3D
  An ITK module to compute 3D thickness
  ☆42Updated 5 months ago
• KitwareMedical / ITKContourInterpolation
  An implementation of morphological contour interpolation
  ☆33Updated 3 weeks ago
• uncbiag / easyreg
  an image registration/augmentation/segmentation package
  ☆173Updated 2 years ago
• aehrc / Mirorr
  Mirorr: Multimodal Image Registration using blOck-matching and Robust Regression
  ☆29Updated 4 years ago
• Borda / pyImSegm
  Image segmentation - general superpixel segmentation & center detection & region growing
  ☆380Updated 3 years ago
• masadcv / FastGeodis
  Fast Implementation of Generalised Geodesic Distance Transform for CPU (OpenMP) and GPU (CUDA)
  ☆104Updated last year
• 3Scan / 3scan-skeleton
  3D Image Skeletonization Tools
  ☆37Updated 2 years ago
• jackyko1991 / Vessel-Centerline-Extraction
  An interactive software to extract vessel centerline
  ☆66Updated 4 years ago
• omarocegueda / registration
  Algorithms for 2D/3D image registration
  ☆31Updated 11 years ago