gabyx / WormAnalysis
Biological Engineering Test Code for Worm Analysis: https://stackoverflow.com/q/37820629/293195
☆40Updated 7 years ago
Alternatives and similar repositories for WormAnalysis:
Users that are interested in WormAnalysis are comparing it to the libraries listed below
- Dijkstra's Shortest Path for 6, 18, and 26-Connected 3D (Volumetric) Image Volumes☆78Updated last week
- Python implementation of discrete skeleton evolution☆18Updated last year
- simple-centerline-extraction☆18Updated last year
- build net work from skeleton image (2D-3D)☆228Updated 2 years ago
- Mirorr: Multimodal Image Registration using blOck-matching and Robust Regression☆27Updated 4 years ago
- Skeletonize densely labeled 3D image segmentations with TEASAR. (Medial Axis Transform)☆142Updated 5 months ago
- Here, we will be showcasing our seminar series “CPP for Image Processing and Machine Learning” including presentations and code examples.…☆58Updated 4 years ago
- ☆25Updated 5 years ago
- geodesic distance transform of 2d/3d images☆134Updated last year
- A Python package for geometric transformations of images for data augmentation in deep learning☆64Updated 5 years ago
- Morphological snakes for image segmentation and tracking☆16Updated 5 years ago
- Python module to analyse skeleton (thin object) images☆120Updated last month
- Python generator for voxel data augmentation☆23Updated 6 years ago
- Euclidean distance & signed distance transform for multi-label 3D anisotropic images using marching parabolas.☆245Updated 6 months ago
- C++ implementation of vesselness measure (or vesselness filter). Both CPU and GPU version are available.☆43Updated 7 years ago
- A 3D level set method, based on a paper for X-Ray CT segmentation of root systems in WACV 2018.☆25Updated 5 years ago
- ☆28Updated 4 years ago
- Ranking Operator Response of Path Openings☆26Updated last year
- 2d or 3d region growing segmentation on gray scale images☆27Updated 4 years ago
- 3D graph cut segmentation☆89Updated 3 years ago
- Fast anisotropic diffusion filter (2D and 3D)☆26Updated 2 years ago
- A loss function (Weighted Hausdorff Distance) for object localization in PyTorch☆89Updated 6 years ago
- Official PyTorch implementation of "Unsupervised Microvascular Image Segmentation Using an Active Contours Mimicking Neural Network"☆72Updated 3 years ago
- Algorithms for 2D/3D image registration☆29Updated 10 years ago
- Python implementation of paper Active Contour Without Edges☆44Updated 7 years ago
- 2d and 3d distance transform based skeletonization☆22Updated last year
- For cell segmentation and tracking.☆35Updated 4 years ago
- Python implementation of 2d and 3d image registration☆33Updated 3 years ago
- ☆34Updated 5 years ago
- an image registration/augmentation/segmentation package☆168Updated 2 years ago