HaploKit / DiseaseCapsuleLinks
Predicting the prevalence of complex genetic diseases from individual genotype profiles using capsule networks
☆15Updated 2 years ago
Alternatives and similar repositories for DiseaseCapsule
Users that are interested in DiseaseCapsule are comparing it to the libraries listed below
Sorting:
- SpliceTransformer(SpTransformer) is a deep learning tool to predict tissue specific splicing site from pre-mRNA sequence☆31Updated last year
- ☆20Updated 5 years ago
- MHC Class I and Class II neoantigen binding prediction☆34Updated 6 months ago
- APA Regression Net - Predict and Engineer Alternative Polyadenylation☆40Updated 4 years ago
- Toolkit for training hyenaDNA-based autoregressive language models on DNA sequences.☆50Updated last year
- Official repository for the paper "Large-scale clinical interpretation of genetic variants using evolutionary data and deep learning". Jo…☆67Updated 3 years ago
- Functional Embedding of Gene Signatures☆48Updated last year
- Knowledge-primed neural networks☆38Updated 2 years ago
- ☆33Updated 3 years ago
- NetTCR-2.0. Sequence-based prediction of peptide-TCR binding☆35Updated 3 years ago
- Predicting gene expression levels from genomic sequences☆54Updated 5 years ago
- BigMHC predicts MHC-I (neo)epitope presentation and immunogenicity☆60Updated last month
- Deep Learning the T Cell Receptor Binding Specificity of Neoantigen☆89Updated 3 years ago
- High-Dimensional Gene Expression and Morphology Profiles of Cells across 28,000 Genetic and Chemical Perturbations☆53Updated 5 months ago
- A network based gene classification library to generate genome wide predictions about genes that are functionally similar to the input ge…☆20Updated 3 weeks ago
- DRUG (Digital RNA with pertUrbation of Genes)-seq data analysis pipeline☆34Updated 10 months ago
- ☆38Updated 2 years ago
- HLA-II ligand predictor.☆46Updated 2 years ago
- Biological Network Integration using Convolutions☆64Updated 2 years ago
- Code repository for the manuscript: Nucleotide dependency analysis of DNA language models reveals genomic functional elements☆25Updated 10 months ago
- Automated Modelling for Biological Evidence-based Research☆47Updated 2 years ago
- Seq2Neo: a comprehensive pipeline for cancer neoantigen immunogenicity prediction☆22Updated 2 years ago
- 🏺 Exploring novel tumor epitope identification☆38Updated 5 years ago
- TCRconv is a deep learning model for predicting recognition between T cell receptors and epitopes. It uses protBERT embeddings for the TC…☆26Updated 3 years ago
- Deep Learning Method to Identify Cancer Associated TCRs☆46Updated 3 years ago
- A Python package for gene network analysis☆32Updated 3 years ago
- Epitope immunogenicity prediction through in silico TCR-peptide contact potential profiling.☆25Updated 2 years ago
- PRedictor of IMmunogenic Epitopes☆25Updated 4 months ago
- MOVE (Multi-Omics Variational autoEncoder) for integrating multi-omics data and identifying cross modal associations☆90Updated last year
- Comparison of Adaptive Immune Receptor Repertoires☆28Updated last year