Alternatives and similar repositories for DiseaseCapsule:

Users that are interested in DiseaseCapsule are comparing it to the libraries listed below

• TeoSakel / deep-drug-response
  ☆19Updated 4 years ago
• MaayanLab / archs4py
  Python package to load and query ARCHS4 data
  ☆20Updated last month
• epigen / KPNN
  Knowledge-primed neural networks
  ☆36Updated 2 years ago
• astrazeneca-cgr-publications / milton-release
  MILTON: Disease prediction with biomarkers and augmented PheWAS analyses
  ☆31Updated 7 months ago
• zzz2010 / 5UTR_Optimizer
  Code for 5UTR project
  ☆24Updated last year
• Genentech / regLM
  Toolkit for training hyenaDNA-based autoregressive language models on DNA sequences.
  ☆38Updated 6 months ago
• ShenLab / gMVP
  ☆21Updated 2 years ago
• ShenLab-Genomics / SpliceTransformer
  SpliceTransformer(SpTransformer) is a deep learning tool to predict tissue specific splicing site from pre-mRNA sequence
  ☆21Updated 5 months ago
• masato-ogishi / Repitope
  Epitope immunogenicity prediction through in silico TCR-peptide contact potential profiling.
  ☆24Updated last year
• HakimBenkirane / CustOmics
  A deep-learning framework for multi-omics integration
  ☆26Updated last year
• KarchinLab / mhcnuggets
  MHC Class I and Class II neoantigen binding prediction
  ☆29Updated 2 years ago
• bhklab / PGx_Guidelines
  ☆10Updated 3 years ago
• CamaraLab / TDA-TCGA
  R package for the identification of cancer-associated mutated genes using gene expression and mutation data.
  ☆10Updated 3 years ago
• carpenter-singh-lab / 2022_Haghighi_NatureMethods
  High-Dimensional Gene Expression and Morphology Profiles of Cells across 28,000 Genetic and Chemical Perturbations
  ☆48Updated 3 months ago
• mnielLab / NetTCR-2.0
  NetTCR-2.0. Sequence-based prediction of peptide-TCR binding
  ☆33Updated 3 years ago
• XSLiuLab / Seq2Neo
  Seq2Neo: a comprehensive pipeline for cancer neoantigen immunogenicity prediction
  ☆21Updated 2 years ago
• instadeepai / multiomics-open-research
  BulkRNABert: Cancer prognosis from bulk RNA-seq based language models
  ☆21Updated 9 months ago
• johli / scrambler
  Interpretation by Deep Generative Masking for Biological Sequences
  ☆37Updated 3 years ago
• GfellerLab / PRIME
  PRedictor of IMmunogenic Epitopes
  ☆18Updated 11 months ago
• GfellerLab / MixMHC2pred
  HLA-II ligand predictor.
  ☆43Updated 2 years ago
• sinc-lab / miRe2e
  ☆14Updated last year
• yunchuankong / GEDFN
  GEDFN: Graph-Embedded Deep Feedforward Network
  ☆23Updated 6 years ago
• FunctionLab / tapioca
  a framework for predicting global protein-protein interaction networks from dynamic mass spec data
  ☆24Updated last year
• chenhcs / FRoGS
  Functional Embedding of Gene Signatures
  ☆43Updated last year
• danasilv / Diffuse2Direct
  Orientation of the protein-protein interaction network using network diffusion techniques
  ☆15Updated 4 years ago
• burkesquires / immunology-informatics
  Immunology Informatics - Big Data Analysis in Immunology - Tutorials
  ☆21Updated 7 years ago
• krishnanlab / PyGenePlexus
  A network based gene classification library to generate genome wide predictions about genes that are functionally similar to the input ge…
  ☆20Updated this week
• CancerRxGene / gdscIC50
  An R package to fit dose response curves for data from the Genomics of Drug Sensitivity of Cancer (GDSC) project.
  ☆25Updated last year
• castillohair / paper-5utr-design
  Code for "Optimizing 5’UTRs for mRNA-delivered gene editing using deep learning"
  ☆18Updated 9 months ago
• kundajelab / coessentiality
  Companion to "A genome-wide almanac of co-essential modules assigns function to uncharacterized genes" (https://doi.org/10.1101/827071)
  ☆27Updated 2 years ago