Franck-Dernoncourt / pubmed-rct
PubMed 200k RCT dataset: a large dataset for sequential sentence classification.
☆194Updated last year
Alternatives and similar repositories for pubmed-rct:
Users that are interested in pubmed-rct are comparing it to the libraries listed below
- ☆91Updated 5 years ago
- MedType: Improving Medical Entity Linking with Semantic Type Prediction☆116Updated last year
- Data and code from our "Inferring Which Medical Treatments Work from Reports of Clinical Trials", NAACL 2019. This work concerns inferrin…☆61Updated 3 years ago
- Code for the emrQA question answering dataset☆144Updated 2 years ago
- PubMed PICO Element Detection Dataset☆56Updated 6 years ago
- ACL'2020: Biomedical Entity Representations with Synonym Marginalization☆161Updated last year
- [NAACL'21 & ACL'21] SapBERT: Self-alignment pretraining for BERT & XL-BEL: Cross-Lingual Biomedical Entity Linking.☆181Updated last year
- A corpus of Biomedical papers annotated with mentions of UMLS entities.☆317Updated 3 years ago
- ☆96Updated 2 years ago
- ☆71Updated last year
- BLUE benchmark consists of five different biomedicine text-mining tasks with ten corpora.☆289Updated 3 years ago
- BioBert Pytorch☆116Updated 2 years ago
- Python wraper for MetaMap☆170Updated 4 years ago
- Pre-trained Language Model for Biomedical Question Answering☆122Updated last year
- ☆145Updated last year
- Clinical Concept Extraction with Contextual Word Embedding☆40Updated 4 years ago
- MedNLI - A Natural Language Inference Dataset For The Clinical Domain☆125Updated last year
- Abbreviation definition dection library trained on PubMed abstracts☆45Updated 4 years ago
- A project for developing transformer-based models for clinical relation extraction☆127Updated last year
- We evaluate many models used for biomedical and clinical nlp tasks, and train new models that perform much better.☆158Updated 3 years ago
- Adversarial Learning of Knowledge Embeddings for the Unified Medical Language System☆40Updated 5 years ago
- BioELMo is a biomedical version of embeddings from language model (ELMo), pre-trained on PubMed abstracts.☆33Updated 5 years ago
- Code for AttentionMeSH☆17Updated 6 years ago
- Machine reading comprehension on clinical case reports☆148Updated 5 years ago
- Crowdsourced ground truth for medical relation extraction.☆68Updated 5 years ago
- CODER: Knowledge infused cross-lingual medical term embedding for term normalization. [JBI, ACL-BioNLP 2022]☆78Updated 2 years ago
- Extracting scientific claims from biomedical abstracts (powered by AllenNLP)☆140Updated 3 years ago
- Conversion from brat-flavored standoff to CoNLL format☆50Updated 4 years ago
- A clinical BERT-based NLP tool for parsing clinical trial abstracts following the PICO framework☆45Updated 4 years ago
- A collection of annotated biomedical corpora, which can be used for training supervised machine learning methods for various tasks in bio…☆36Updated 6 years ago