A Python package and command-line interface for extracting knowledge graphs from text, with a special focus on supporting agents working with scientific hypotheses and experiment design
☆22Jan 13, 2026Updated 6 months ago
Alternatives and similar repositories for llm-text-to-knowledge-graph
Users that are interested in llm-text-to-knowledge-graph are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A computational method for comparing cellular profiles with the flexibility to place a higher weight on functional features of interest.☆12Jan 31, 2023Updated 3 years ago
- ☆13Oct 4, 2022Updated 3 years ago
- The Systems Biology Ontology (SBO) is a set of controlled, relational vocabularies of terms commonly used in Systems Biology, and in part…☆12May 16, 2023Updated 3 years ago
- Stable diffusion google colab kernel☆11Aug 17, 2022Updated 3 years ago
- Finding regions of similarity between plasmids☆17Jul 15, 2026Updated 3 weeks ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Update RCytoscape to work for Cytoscape 3.0 and higher using CyREST☆16Feb 3, 2018Updated 8 years ago
- web based visualisation of molecular interaction data☆12May 22, 2025Updated last year
- Meteor+React+Antd tutorial step by step☆10Mar 2, 2017Updated 9 years ago
- Tool for generating Python AWS Lambda zip files☆10Jul 8, 2019Updated 7 years ago
- a streamlining post Spectronaut™ DIA-MS data analysis R package☆15Jun 1, 2026Updated 2 months ago
- Space-themed Soko-Ban clone created in Python using Pyxel.☆17Feb 18, 2026Updated 5 months ago
- ☆19May 19, 2025Updated last year
- LipidFinder: A computational workflow for discovery of new lipid molecular species☆22Feb 14, 2021Updated 5 years ago
- Python library for SBGN☆11May 19, 2026Updated 2 months ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- 医学统计学与临床建模☆16Mar 26, 2020Updated 6 years ago
- The pls R package☆39Jul 30, 2026Updated last week
- related data process code for MDKG construction and application☆15Jun 19, 2025Updated last year
- Libraries for the Systems Biology Graphical Notation (SBGN); Java and C++☆19Oct 8, 2024Updated last year
- Investigating the role of pre-training dataset size and diversity on the performance of single-cell foundation models☆20May 12, 2026Updated 2 months ago
- ☆25Sep 21, 2023Updated 2 years ago
- fulltext-article-downloader is a Python package for programmatically downloading the full text of research articles from their DOIs. It c…☆19May 12, 2025Updated last year
- This repository contains the official implementation of the paper "BioGraphFusion: Graph Knowledge Embedding for Biological Completion an…☆16Nov 5, 2025Updated 9 months ago
- A project for exploring differentially active signaling paths related to proteomics datasets☆46Apr 2, 2026Updated 4 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- COVID-19 Knowledge Graph: a computable, multi-modal, cause-and-effect knowledge model of COVID-19 pathophysiology☆43Jul 5, 2021Updated 5 years ago
- Building API and tools for EPO OPS patent data☆10Mar 16, 2017Updated 9 years ago
- A pipeline to identify gene family using mutiple tools and scripts.☆11Aug 22, 2021Updated 4 years ago
- An open-source Python package for accurate and sensitive peptide and protein quantification.☆21Aug 1, 2026Updated last week
- A deep-learning-based multiple toolkits (DeTool) approach that uses the inputs of enzymes and substrates for biocatalystic tasks.☆14Nov 24, 2023Updated 2 years ago
- BigSMILES☆11Jun 16, 2024Updated 2 years ago
- Hugo Multi BootSwatch Theme is a single column theme for [hugo](http://hugo.spf13.com/) based on [Twitter Bootstrap](http://getbootstrap.…☆22Apr 6, 2020Updated 6 years ago
- VenomPred 2.0 API☆11Jul 7, 2026Updated last month
- Python code and jupyter notebooks to accompany the manuscript "Deep learning models for lipid-nanoparticle-based drug delivery"☆14Jul 28, 2020Updated 6 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Decoding Single-Cell Omics of Perturbation Responses Using DeSCOPE☆25Aug 1, 2026Updated last week
- Python wrapper for OSRA. Supports R-Group logic and integration with ChemSchematicResolver☆10Apr 4, 2020Updated 6 years ago
- A simple and easy-to-use Python wrapper for libCZI - a cross-platform C++ library intended for providing read and write access to CZI doc…☆33Jul 6, 2026Updated last month
- R-Based API for accessing the MSKCC Cancer Genomics Data Server (CGDS)☆25Dec 15, 2020Updated 5 years ago
- A Rust-Based suite of utilities for ultra-fast genomic feature extraction☆44Dec 18, 2025Updated 7 months ago
- STRIDE: Species Tree Root Inference from Gene Duplication Events☆10Aug 28, 2018Updated 7 years ago
- From cryo-EM density map to atomic structure☆34Jun 17, 2026Updated last month