Alternatives and similar repositories for chi:

Users that are interested in chi are comparing it to the libraries listed below

• FDA / CiPA
  ☆33Updated last year
• BMSQSP / QSPToolbox
  This is the fully public version of QSP Toolbox. Please check the README file for the current version of MATLAB that is supported.
  ☆24Updated last year
• Marowalker / retrain_w2v
  retrain word2vec embedding with data from PMC and PubMed (soon)
  ☆11Updated last year
• EPFL-LCSB / skimpy
  Symbolic Kinetic Models with Python
  ☆31Updated 2 weeks ago
• Open-Systems-Pharmacology / OSP-based-publications-and-content
  Publications of all kind based on the Open Systems Pharmacology Suite
  ☆15Updated 2 years ago
• Benchmarking-Initiative / Benchmark-Models-PEtab
  A collection of mathematical models with experimental data in the PEtab format as benchmark problems in order to evaluate new and existin…
  ☆29Updated last month
• PEtab-dev / PEtab
  PEtab - an SBML and TSV based data format for parameter estimation problems in systems biology
  ☆61Updated this week
• DataSciBurgoon / aop-ontology
  Adverse Outcome Pathway Ontology
  ☆11Updated 11 months ago
• USEPA / CompTox-PK-CvTdb
  ☆21Updated 5 months ago
• pyrates-neuroscience / PyCoBi
  Python package for automated bifurcation analysis and parameter continuations, based on Auto-07p.
  ☆22Updated last month
• SKscience / Anabel
  An Online Tool for the Real-Time Kinetic Analysis of Binding Events
  ☆14Updated last week
• ICB-DCM / parPE
  Parameter estimation for dynamical models using high-performance computing, batch and mini-batch optimizers, and dynamic load balancing.
  ☆21Updated last month
• PEtab-dev / libpetab-python
  Python package for working with PEtab files
  ☆14Updated last week
• yaml2sbml-dev / yaml2sbml
  Tool to convert an ODE model specified in the YAML format to SBML.
  ☆12Updated last year
• PKPDAI / PKDocClassifier
  Binary classifier to identify scientific publications reporting pharmacokinetic parameters estimated in vivo
  ☆18Updated last year
• myokit / myokit
  Source code, issues, and discussions for Myokit: A tool for cardiac electrophysiology modelling and simulation
  ☆39Updated 3 weeks ago
• matthiaskoenig / sbmlutils
  Python utilities for SBML
  ☆40Updated last month
• Open-Systems-Pharmacology / PK-Sim
  PK-Sim® is a comprehensive software tool for whole-body physiologically based pharmacokinetic modeling
  ☆111Updated last week
• SABS-R3-projects / PKPD
  A simple, graphical pharmacokinetic-pharmacodynamic modelling solution
  ☆18Updated 5 years ago
• jtmff / torord
  Repository for the cardiac model ToR-ORd
  ☆13Updated 3 years ago
• AMICI-dev / AMICI
  Advanced Multilanguage Interface to CVODES and IDAS
  ☆115Updated this week
• MicroPhen / pyFOOMB
  Framework for Object Oriented Modelling of Bioprocesses
  ☆15Updated 4 years ago
• ronceray / StochasticForceInference
  Python implementation of the force and diffusion inference method described in (Frishman and Ronceray, Phys. Rev. X 10, 021009, 2020).
  ☆28Updated 2 years ago
• copasi / COPASI
  COPASI is a software application for simulation and analysis of biochemical networks and their dynamics.
  ☆105Updated last week
• biosustain / Maud
  Enzyme models that take into account kinetics, allostery and thermodynamics
  ☆27Updated 6 months ago
• openPfizer / covid19-immune-model
  QSP model of immune response to COVID19
  ☆10Updated 4 years ago
• LoLab-MSM / pyvipr
  Jupyter widget for the dynamic and static visualizations of systems biology models written in PySB, BNGL, and SBML
  ☆27Updated 2 years ago
• physicell-training / ws2022
  2022 PhysiCell Hackathon and Workshop
  ☆12Updated 2 years ago
• PySCeS / pysces
  The official PySCeS project source code repository.
  ☆38Updated 4 months ago
• SBRG / MASSpy
  ☆22Updated 2 years ago