ronceray / StochasticForceInferenceLinks
Python implementation of the force and diffusion inference method described in (Frishman and Ronceray, Phys. Rev. X 10, 021009, 2020).
☆28Updated 2 years ago
Alternatives and similar repositories for StochasticForceInference
Users that are interested in StochasticForceInference are comparing it to the libraries listed below
Sorting:
- Python implementation of Underdamped Langevin Inference, a method to infer the dynamical equation of underdamped stochastic systems from …☆16Updated 2 years ago
- RHEOS - Open Source Rheology data analysis software☆49Updated 3 weeks ago
- KITP tutorial codes for Active Brownian Particles☆12Updated 4 years ago
- custom LAMMPS fix used for Brownian Dynamics Simulation (Overdamped Langevin)☆17Updated 3 years ago
- Biologically-informed neural networks☆28Updated 4 years ago
- Modeling toolkit for biochemical simulation☆74Updated 4 months ago
- GPU-accelerated simulations of Voronoi and vertex models of cells. Initial version published in Computer Physics Communications: https://…☆22Updated 2 weeks ago
- Tutorial on "Simulations of pattern formation in biological cells"☆13Updated last month
- andi_datasets provides functions to generate, save, load and manipulate datasets of diffusion anomalous trajectories. It is part of the A…☆30Updated 5 months ago
- A python code to calculate the Brownian motion of colloidal particles in a time varying force field.☆20Updated 6 months ago
- Stiff Neural Ordinary Differential Equations☆34Updated last year
- Soft Active Matter on Surfaces☆31Updated last month
- Autonomous Data Acquisition, Uncertainty Quantification and HPC Optimization☆26Updated this week
- PyStokes: phoresis and Stokesian hydrodynamics in Python. github.com/rajeshrinet/pystokes☆47Updated last month
- Interactive, particle-based physics, chemistry and biology modeling and simulation environment☆22Updated this week
- 3D computational model for lipid membranes☆23Updated 3 months ago
- Simulates vertex model with an additional motility force☆8Updated 8 years ago
- Methods for numerical differentiation of noisy data in python☆114Updated this week
- Material for the RWTH Julia workshop on 17th and 18th February 2022☆22Updated 2 years ago
- Interacting Active Surfaces☆10Updated 2 years ago
- Parameter estimation for dynamical models using high-performance computing, batch and mini-batch optimizers, and dynamic load balancing.☆22Updated 3 months ago
- PEtab - an SBML and TSV based data format for parameter estimation problems in systems biology☆61Updated last week
- Python version of Rick Chartrand's algorithm for numerical differentiation of noisy data☆72Updated 4 years ago
- Advanced Multilanguage Interface to CVODES and IDAS☆120Updated this week
- Class materials for computational physics course☆151Updated 4 months ago
- Materials for ACerS Automated Experiment Course☆20Updated last year
- A python package for producing publication quality images using matplotlib.☆100Updated 4 years ago
- The Active Matter Evaluation Package (AMEP) - a Python library for the analysis of particle-based and continuum simulation data of soft a…☆18Updated 2 months ago
- Benchmark for learning stiff problems using physics-informed machine learning☆12Updated 3 years ago
- numerical solution to 1D reaction diffusion equations☆12Updated 6 years ago