CNCBI / Bowtie2-Manual-CN

Related projects: ⓘ

• CNCBI / Samtools-Manual-CN
  Samtools' manual in Chinese - Samtools中文使用手册
  ☆17Updated 8 years ago
• gao-lab / CPC2_standalone
  Official repo for the standalone package of Coding Potential Calculator (CPC) 2.
  ☆23Updated 3 years ago
• decodebiology / rpkm_rnaseq_count
  RPKM for RNASeq counts
  ☆16Updated 3 years ago
• namphuon / ViFi
  Pipeline for identifying viral integration and fusion mRNA reads from NGS data. Manuscript is currently in preparation.
  ☆27Updated 3 years ago
• chizksh / digenome-toolkit2
  Digenome-toolkit ver2.
  ☆15Updated 2 years ago
• WGLab / LIQA
  Long-read Isoform Quantification and Analysis
  ☆39Updated last month
• Ensembl / treebest
  TreeBeST: Tree Building guided by Species Tree (Ensembl Compara modifications)
  ☆21Updated 4 years ago
• MonashBioinformaticsPlatform / RSeQC
  fork of RSeQC python RNAseq metrics suit of tools
  ☆45Updated 5 years ago
• ben-lerch / IsoSeq-3.0
  ☆25Updated this week
• davetang / research_parasite
  How research parasites can download your data!
  ☆14Updated last month
• jianhong / trackViewer.documentation
  documentation for trackViewer
  ☆29Updated 5 years ago
• nspies / svviz2
  for visual evaluation of read support for structural variation
  ☆49Updated 3 months ago
• Tong-Chen / NGS
  Scripts for next generation sequencing
  ☆47Updated 4 years ago
• TomSkelly / MatchAnnot
  Python scripts for matching output of Pacific Biosciences IsoSeq RNA-seq pipeline to an annotation file.
  ☆24Updated 8 years ago
• LabTranslationalArchitectomics / riboWaltz
  optimization of ribosome P-site positioning in ribosome profiling data
  ☆43Updated 8 months ago
• 4ureliek / TEanalysis
  Analysis of TE contribution to features (transcripts or simple features). Includes utils to test enrichment.
  ☆23Updated 5 years ago
• bioinform / rnacocktail
  ☆87Updated 3 years ago
• oicr-gsi / debarcer
  Debarcer: A package for De-Barcoding and Error Correction of sequencing data containing molecular barcodes
  ☆15Updated 3 years ago
• billzt / gff3sort
  GFF3sort: A Perl Script to sort gff3 files and produce suitable results for tabix tools
  ☆47Updated 4 years ago
• tanghaibao / bio-pipeline
  My collection of light bioinformatics analysis pipelines for specific tasks
  ☆70Updated 4 months ago
• hangelwen / miR-PREFeR
  microRNA PREdiction From small RNA-seq data
  ☆29Updated 6 years ago
• junchaoshi / sports1.1
  Small non-coding RNA annotation Pipeline Optimized for rRNA- and tRNA-Derived Small RNAs
  ☆45Updated last month
• ENCODE-DCC / long-read-rna-pipeline
  ENCODE long read RNA-seq pipeline
  ☆44Updated last year
• EI-CoreBioinformatics / portcullis
  Splice junction analysis and filtering from BAM files
  ☆37Updated 2 years ago
• deepomicslab / SpecHLA
  SpecHLA reconstructs entire diploid sequences of HLA genes and infers LOH events. It supports HLA-A, -B, -C, -DPA1, -DPB1, -DQA1, -DQB1, …
  ☆33Updated last month
• BGI-flexlab / SOAPTyping
  HLA typing for Sanger Based Test
  ☆16Updated last year
• xmao / kobas
  KOBAS: a command line tool for identifying significant pathways from genomic data
  ☆30Updated 14 years ago
• Jeltje / varscan2
  Scripts to run copynumber variation calls on tumor and normal BAM files using Varscan2
  ☆28Updated 6 years ago
• rvolden / Mandalorion-Episode-II
  Version II of Mandalorion
  ☆32Updated 5 years ago
• zhpn1024 / ribotish
  Ribo-seq TIS Hunter, predicting translation initiation sites and ORFs using riboseq data
  ☆24Updated 2 years ago