CCI-Bonn / HD-GLIO-AUTOLinks
Automated processing of MRI in neuro-oncology (combining HD-BET, image co-registration, and HD-GLIO in one container)
☆32Updated 3 years ago
Alternatives and similar repositories for HD-GLIO-AUTO
Users that are interested in HD-GLIO-AUTO are comparing it to the libraries listed below
Sorting:
- Automated deep-learning based brain extraction applicable to a broad range of MRI sequence types and with robust performance even in the …☆37Updated 4 years ago
- Automated deep-learning based brain tumor segmentation on MRI☆35Updated 3 years ago
- Automatic sorting of brain MRI scans by scan type☆26Updated 9 months ago
- Brain extraction in presence of abnormalities, using single and multiple MRI modalities☆36Updated 7 months ago
- The easiest tool for experimenting with radiomics features.☆41Updated last year
- A project to provide custom sorting and renaming of dicom files☆79Updated 5 months ago
- Pre-trained models and utilities for deep learning on medical images in Python (Keras/TensorFlow)☆234Updated 3 weeks ago
- This is a tool to quickly preview nifti images on the terminal☆65Updated 8 months ago
- RadQy is a quality assurance and checking tool for quantitative assessment of magnetic resonance imaging (MRI) and computed tomography (C…☆107Updated 2 months ago
- Normalize MR image intensities in Python☆337Updated 3 months ago
- Robust Brain Extraction Tool for CT Head Images☆49Updated 5 years ago
- Workflow for Optimal Radiomics Classification☆79Updated 2 months ago
- Lesion and prostate masks for the PROSTATEx training dataset, after a lesion-by-lesion quality check.☆87Updated 3 years ago
- Code to preprocess, segment, and fuse glioma MRI scans based on the BraTS Toolkit manuscript.☆93Updated last month
- Preprocessing pipeline on Brain MR Images through FSL and ANTs, including registration, skull-stripping, bias field correction, enhanceme…☆208Updated 7 years ago
- Brain CT image segmentation, normalisation, skull-stripping and total brain/intracranial volume computation.☆78Updated last year
- MRI brain extraction tool☆367Updated 10 months ago
- Transparent and reproducible medical image processing pipelines in Python.☆50Updated last week
- Software for automatic segmentation and generation of standardized clinical reports of brain tumors from MRI volumes☆43Updated 3 months ago
- Medical Image Radiomics Processor☆72Updated 2 months ago
- Resurces for MRI images processing and deep learning in 3D☆142Updated 3 years ago
- A UNet for the analysis of perfusion CT imaging in the setting of acute ischemic stroke.☆17Updated 5 months ago
- Pretrained neural networks for UK Biobank brain MRI images. SFCN, 3D-ResNet etc.☆162Updated last year
- Framework for the reproducible processing of neuroimaging data with deep learning methods☆174Updated 3 weeks ago
- Precision medicine toolbox☆70Updated last year
- Library for generating images by sampling a GMM conditioned on label maps☆27Updated last year
- Deep Learning tools for brain medical images☆139Updated last year
- ☆60Updated last year
- LST-AI - Deep Learning Ensemble for Accurate MS Lesion Segmentation☆39Updated 7 months ago
- A space to log issues, updates, and software related to the ATLAS (Anatomical Tracings of Lesions After Stroke) database.☆83Updated 2 years ago