Automated processing of MRI in neuro-oncology (combining HD-BET, image co-registration, and HD-GLIO in one container)
☆35Jun 5, 2022Updated 4 years ago
Alternatives and similar repositories for HD-GLIO-AUTO
Users that are interested in HD-GLIO-AUTO are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Automated deep-learning based brain tumor segmentation on MRI☆41Aug 24, 2022Updated 3 years ago
- Automated deep-learning based brain extraction applicable to a broad range of MRI sequence types and with robust performance even in the …☆40Jul 14, 2021Updated 5 years ago
- Code for deep learning-based glioma/tumor growth models☆27Nov 30, 2021Updated 4 years ago
- Automated deep learning based segmentation of multiple sclerosis lesions on MRI☆15Sep 6, 2022Updated 3 years ago
- This repository contains code used to prepare the LUMIERE Glioblastoma dataset.☆39Feb 14, 2024Updated 2 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Full head segmentation☆54Jul 15, 2026Updated last month
- Automatic sorting of brain MRI scans by scan type☆26Jan 13, 2025Updated last year
- Tools for accessing open data sets published by the Allen Institute for Brain Sciences☆16Jun 29, 2021Updated 5 years ago
- Data, notebooks, and articles associated with the RSNA AI Deep Learning Lab at RSNA 2021☆81Apr 20, 2022Updated 4 years ago
- A Slicer extension to provide a GUI around pyradiomics☆122Jun 21, 2026Updated last month
- 3D Slicer modules for brain segmentation using deep learning.☆32Mar 5, 2024Updated 2 years ago
- Modular pipeline for integrated analysis of the tumour microenvironment using multiplex imaging☆14Jul 29, 2025Updated last year
- A deep learning python package for neuroimaging data. Made by:☆131Jun 24, 2020Updated 6 years ago
- Normalize MR image intensities in Python☆340Aug 4, 2026Updated 2 weeks ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Software for automatic segmentation and generation of standardized clinical reports of brain tumors from MRI volumes☆47Jan 15, 2026Updated 7 months ago
- BIDS Manage is a software aiming at importing and organising data in BIDS standard☆10May 24, 2023Updated 3 years ago
- Dynamic Susceptibility Contrast MRI toolbox - AIF selection, deconvolution and leakage correction☆15Mar 29, 2022Updated 4 years ago
- Self-guided notebook tutorials to help get started with IDC☆49Jul 30, 2026Updated 2 weeks ago
- ☆13Dec 1, 2022Updated 3 years ago
- xGAP is an efficient, modular, extensible and fault-tolerant pipeline for massively parallelized genomic analysis/variant discovery from …☆11Oct 21, 2020Updated 5 years ago
- Transparent and reproducible medical image processing pipelines in Python.☆60Aug 4, 2026Updated 2 weeks ago
- MRI brain extraction tool☆432Dec 18, 2024Updated last year
- Data, notebooks, and articles associated with the RSNA AI Deep Learning Lab☆31Jan 23, 2023Updated 3 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- ☆82Sep 2, 2025Updated 11 months ago
- ☆17Dec 16, 2019Updated 6 years ago
- Ankidecks fuer 100 Tage Lernplan☆27Jan 5, 2021Updated 5 years ago
- PaNeV: an R package for a pathway-based network visualization☆10Aug 25, 2025Updated 11 months ago
- Hyppopy is a python toolbox for blackbox optimization. It's purpose is to offer a unified and easy to use interface to a collection of so…☆27Apr 26, 2022Updated 4 years ago
- ☆12Mar 18, 2024Updated 2 years ago
- A modular and extensible framework for training and evaluating semantic segmentation models with PyTorch Lightning, supporting multiple a…☆26Apr 23, 2026Updated 3 months ago
- Python package to simplify access to the data available in NCI Imaging Data Commons☆28Aug 10, 2026Updated last week
- Automated Detection of Focal Cortical Dysplasia using Deep Learning☆17Nov 16, 2025Updated 9 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Overlooked Factors in Concept-based Explanations: Dataset Choice, Concept Learnability, and Human Capability (CVPR 2023)☆10Mar 14, 2023Updated 3 years ago
- ☆10Feb 23, 2022Updated 4 years ago
- ☆27Feb 13, 2025Updated last year
- A tool to do quick and dirty inspection of multichannel 3D data. I use it mainly to visualize batches for deep learning.☆53Feb 8, 2025Updated last year
- Python Library for data analysis based on GMQL☆15Dec 1, 2021Updated 4 years ago
- Pretrained neural networks for UK Biobank brain MRI images. SFCN, 3D-ResNet etc.☆177Sep 26, 2024Updated last year
- Open-source python package for the extraction of Radiomics features from 2D and 3D images and binary masks. Support: https://discourse.sl…☆1,438Oct 27, 2025Updated 9 months ago