Automated processing of MRI in neuro-oncology (combining HD-BET, image co-registration, and HD-GLIO in one container)
☆34Jun 5, 2022Updated 3 years ago
Alternatives and similar repositories for HD-GLIO-AUTO
Users that are interested in HD-GLIO-AUTO are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Automated deep-learning based brain tumor segmentation on MRI☆40Aug 24, 2022Updated 3 years ago
- Automated deep-learning based brain extraction applicable to a broad range of MRI sequence types and with robust performance even in the …☆40Jul 14, 2021Updated 4 years ago
- Code for deep learning-based glioma/tumor growth models☆27Nov 30, 2021Updated 4 years ago
- Automated deep learning based segmentation of multiple sclerosis lesions on MRI☆15Sep 6, 2022Updated 3 years ago
- This repository contains code used to prepare the LUMIERE Glioblastoma dataset.☆38Feb 14, 2024Updated 2 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- 3D Slicer modules for brain segmentation using deep learning.☆32Mar 5, 2024Updated 2 years ago
- Data, notebooks, and articles associated with the RSNA AI Deep Learning Lab at RSNA 2021☆81Apr 20, 2022Updated 4 years ago
- Modular pipeline for integrated analysis of the tumour microenvironment using multiplex imaging☆14Jul 29, 2025Updated 10 months ago
- Automatic sorting of brain MRI scans by scan type☆26Jan 13, 2025Updated last year
- A spectral and spatial CEST simulation tool☆15Feb 19, 2025Updated last year
- Digital Images Processing and Segmentation for Brain Tumor MRI scan☆13Apr 20, 2018Updated 8 years ago
- A deep learning python package for neuroimaging data. Made by:☆130Jun 24, 2020Updated 5 years ago
- Code accompanying the paper "Radiomics for glioblastoma survival analysis in pre-operative MRI: exploring feature robustness, class bound…☆11Aug 9, 2020Updated 5 years ago
- Normalize MR image intensities in Python☆342Jul 21, 2025Updated 10 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Software for automatic segmentation and generation of standardized clinical reports of brain tumors from MRI volumes☆45Jan 15, 2026Updated 4 months ago
- Predicting genetics and providing segmentation of glioma☆20Aug 13, 2024Updated last year
- Python package to simplify access to the data available in NCI Imaging Data Commons☆25May 20, 2026Updated last week
- Self-guided notebook tutorials to help get started with IDC☆47Feb 16, 2026Updated 3 months ago
- Medical image processing toolbox for quick preprocessing of CTs and MRIs☆17May 5, 2022Updated 4 years ago
- ☆13Dec 1, 2022Updated 3 years ago
- ISBI 2023 - A Registration- and Uncertainty-based Framework for White Matter Tract Segmentation with Only One Annotated Subject☆10Sep 10, 2023Updated 2 years ago
- Transparent and reproducible medical image processing pipelines in Python.☆59Apr 30, 2026Updated 3 weeks ago
- BIDS Manage is a software aiming at importing and organising data in BIDS standard☆10May 24, 2023Updated 3 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- MRI brain extraction tool☆416Dec 18, 2024Updated last year
- This repository supports the BENDER series of videos for the MICCAI Education Challenge, 2022.☆15May 13, 2026Updated 2 weeks ago
- Data, notebooks, and articles associated with the RSNA AI Deep Learning Lab☆31Jan 23, 2023Updated 3 years ago
- PaNeV: an R package for a pathway-based network visualization☆10Aug 25, 2025Updated 9 months ago
- Slicer3D extension for rating using Likert-type score Deep-learning generated segmentations, with segment editor functionality. Created t…☆26May 20, 2026Updated last week
- ☆16Dec 16, 2019Updated 6 years ago
- A resource website for people doing CEST MRI on a Siemens platform☆20Apr 16, 2026Updated last month
- Hyppopy is a python toolbox for blackbox optimization. It's purpose is to offer a unified and easy to use interface to a collection of so…☆27Apr 26, 2022Updated 4 years ago
- ☆12Mar 18, 2024Updated 2 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- A modular and extensible framework for training and evaluating semantic segmentation models with PyTorch Lightning, supporting multiple a…☆25Apr 23, 2026Updated last month
- This Python Program takes a keyword and outputs n abstracts + bibliographies from PubMed☆20Jul 20, 2020Updated 5 years ago
- Overlooked Factors in Concept-based Explanations: Dataset Choice, Concept Learnability, and Human Capability (CVPR 2023)☆10Mar 14, 2023Updated 3 years ago
- ☆27Feb 13, 2025Updated last year
- A tool to do quick and dirty inspection of multichannel 3D data. I use it mainly to visualize batches for deep learning.☆54Feb 8, 2025Updated last year
- Python Library for data analysis based on GMQL☆15Dec 1, 2021Updated 4 years ago
- Pretrained neural networks for UK Biobank brain MRI images. SFCN, 3D-ResNet etc.☆174Sep 26, 2024Updated last year