CCI-Bonn / HD-GLIO-AUTO
Automated processing of MRI in neuro-oncology (combining HD-BET, image co-registration, and HD-GLIO in one container)
☆28Updated 2 years ago
Alternatives and similar repositories for HD-GLIO-AUTO:
Users that are interested in HD-GLIO-AUTO are comparing it to the libraries listed below
- Automated deep-learning based brain tumor segmentation on MRI☆30Updated 2 years ago
- Automated deep-learning based brain extraction applicable to a broad range of MRI sequence types and with robust performance even in the …☆35Updated 3 years ago
- Automatic sorting of brain MRI scans by scan type☆24Updated 3 months ago
- Brain extraction in presence of abnormalities, using single and multiple MRI modalities☆34Updated last month
- Robust Brain Extraction Tool for CT Head Images☆46Updated 4 years ago
- A project to provide custom sorting and renaming of dicom files☆78Updated 9 months ago
- Workflow for Optimal Radiomics Classification☆74Updated 2 months ago
- Open MS Data☆24Updated 5 years ago
- Software for automatic segmentation and generation of standardized clinical reports of brain tumors from MRI volumes☆38Updated last week
- RadQy is a quality assurance and checking tool for quantitative assessment of magnetic resonance imaging (MRI) and computed tomography (C…☆98Updated last month
- Lesion and prostate masks for the PROSTATEx training dataset, after a lesion-by-lesion quality check.☆82Updated 2 years ago
- Library for generating images by sampling a GMM conditioned on label maps☆25Updated last year
- This is a tool to quickly preview nifti images on the terminal☆60Updated 3 months ago
- Brain CT image segmentation, normalisation, skull-stripping and total brain/intracranial volume computation.☆72Updated 9 months ago
- Easy multiple sclerosis white matter lesion segmentation using convolutional deep neural networks.☆47Updated last year
- Brain Extraction Tool in Python☆40Updated last month
- ☆20Updated 3 years ago
- RadTract: enhanced tractometry with radiomics-based imaging biomarkers for improved predictive modelling.☆11Updated 10 months ago
- LST-AI - Deep Learning Ensemble for Accurate MS Lesion Segmentation☆32Updated last month
- Brain Segmentation with MONAI and Dynamic Unet (nn-unet)☆24Updated 3 months ago
- The easiest tool for experimenting with radiomics features.☆40Updated last year
- Code for implementation of Unlearning Scanner Bias for MRI Harmonisation☆27Updated 3 years ago
- Transparent and reproducible medical image processing pipelines in Python.☆46Updated this week
- TF2.3 DCE-/DSC-MRI processing code, collected, tested and made available to all.☆38Updated 2 months ago
- DeepBleed: 3D Volumetric Intracranial Hemorrhage Segmentation for Clinical Trials☆27Updated last year
- Automated deep learning based segmentation of multiple sclerosis lesions on MRI☆10Updated 2 years ago
- A deep learning framework for automated analysis of body composition from abdominal CT☆18Updated 11 months ago
- Automated processing tool for MRI in neuro-oncology (brain tumor segmentation, volumetric tumor response assessment) provided as Containe…☆11Updated 2 years ago
- Extract and evaluate radiomics for liver cancer tumors from DICOM segmentation masks. Using SimpleITK, PyRadiomics and PyDicom.☆25Updated 2 years ago
- Visualization for radiomics feature generated by pyradiomics☆50Updated 4 months ago