Automated deep-learning based brain tumor segmentation on MRI
☆41Aug 24, 2022Updated 4 years ago
Alternatives and similar repositories for HD-GLIO
Users that are interested in HD-GLIO are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Automated processing of MRI in neuro-oncology (combining HD-BET, image co-registration, and HD-GLIO in one container)☆35Jun 5, 2022Updated 4 years ago
- Automated deep-learning based brain extraction applicable to a broad range of MRI sequence types and with robust performance even in the …☆40Jul 14, 2021Updated 5 years ago
- Automated deep learning based segmentation of multiple sclerosis lesions on MRI☆15Sep 6, 2022Updated 3 years ago
- Code for deep learning-based glioma/tumor growth models☆27Nov 30, 2021Updated 4 years ago
- Automated processing tool for MRI in neuro-oncology (brain tumor segmentation, volumetric tumor response assessment) provided as Containe…☆11Aug 8, 2022Updated 4 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- MRI brain extraction tool☆433Dec 18, 2024Updated last year
- This repository contains code used to prepare the LUMIERE Glioblastoma dataset.☆39Feb 14, 2024Updated 2 years ago
- Python script to obtain dynamic functional connectivity metrics, after using a sliding window approach, statistical analyses to test for …☆12Sep 10, 2024Updated last year
- Dipy pipeline for reconstruction and tracking of tractography from Human Connectome Project dataset☆11Nov 18, 2015Updated 10 years ago
- Glioblastoma Surgery Imaging - Reporting And Data System (GSI-RADS).☆20May 30, 2022Updated 4 years ago
- RSANet: Recurrent Slice-wise Attention Network for Multiple Sclerosis Lesion Segmentation (MICCAI 2019)☆26Feb 4, 2020Updated 6 years ago
- HDR-MRI Algorithms from "Local contrast-enhanced MR images via high dynamic range processing" published in MRM☆17Nov 13, 2018Updated 7 years ago
- Data, notebooks, and articles associated with the RSNA AI Deep Learning Lab at RSNA 2021☆82Apr 20, 2022Updated 4 years ago
- Paper on Brain Extraction for CT Imaging☆24Aug 27, 2018Updated 8 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Variance pooling to incorporate ITH in CPath models - MICCAI 2022☆26Sep 27, 2022Updated 3 years ago
- Code, data and model for Pérez-García et al. 2021, "A self-supervised learning strategy for postoperative brain cavity segmentation simul…☆19Jul 16, 2024Updated 2 years ago
- quick segmentation of the hippocampus from T1 MRI images. (pytorch version)☆32Dec 8, 2025Updated 8 months ago
- RadTract: enhanced tractometry with radiomics-based imaging biomarkers for improved predictive modelling.☆15Apr 2, 2026Updated 5 months ago
- A modular and extensible framework for training and evaluating semantic segmentation models with PyTorch Lightning, supporting multiple a…☆26Apr 23, 2026Updated 4 months ago
- BIDS Manage is a software aiming at importing and organising data in BIDS standard☆10May 24, 2023Updated 3 years ago
- Python Implementation of the CoLlAGe radiomics descriptor. CoLlAGe captures subtle anisotropic differences in disease pathologies by meas…☆20Aug 14, 2023Updated 3 years ago
- Package to quantify intra-tumor heterogeneity (ITH) from CT images☆18Oct 14, 2022Updated 3 years ago
- Code to preprocess, segment, and fuse glioma MRI scans based on the BraTS Toolkit manuscript.☆105Sep 23, 2025Updated 11 months ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Dockerfile templates commonly used in BIDS Apps☆11Mar 16, 2026Updated 5 months ago
- Docker for running stroke lesion core segmentation☆31Dec 15, 2020Updated 5 years ago
- Code for automated brain tumor segmentation from MRI scans using CNNs with attention mechanisms, deep supervision, and Swin-Transformers.…☆17Nov 17, 2023Updated 2 years ago
- ☆13Dec 1, 2022Updated 3 years ago
- DICOM Image Analysis and Archive☆18Aug 26, 2025Updated last year
- Registration of medical MR brain images to a common mr brain☆12Oct 24, 2020Updated 5 years ago
- ICH Segmentation of CT scans☆27Nov 18, 2025Updated 9 months ago
- Machine learning methods for spatially resolved transcriptomics with histology images: a collection of related resources.☆10Mar 22, 2022Updated 4 years ago
- Julia toolbox for Quantitative Susceptibility Mapping☆17Feb 15, 2024Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- CTseg: A Tool for Brain CT Segmentation, Spatial Normalisation, and Volumetrics☆91May 27, 2026Updated 3 months ago
- Segmentation of Choroid Plexus using Gaussian Mixture Model☆21Apr 8, 2025Updated last year
- WhiFuN offers researchers a user-friendly suite of automated tools for investigating brain functional connectivity (FC) in White Matter (…☆12Jul 21, 2026Updated last month
- Scripts to work with the chaos challenge☆27Mar 4, 2019Updated 7 years ago
- A Slicer extension to provide a GUI around pyradiomics☆123Jun 21, 2026Updated 2 months ago
- Repository for the Medical Out-of-Distribution Analysis Challenge.☆65Jul 25, 2024Updated 2 years ago
- Brain Lesion Analysis and Segmentation Tool for Computed Tomography☆76Jul 5, 2026Updated last month