Alternatives and similar repositories for deepFCD

Users that are interested in deepFCD are comparing it to the libraries listed below

• freesurfer / surfa
  Python utilities for medical image and surface-based analysis
  ☆38Updated 3 weeks ago
• nipreps / niworkflows
  Common workflows for MRI (anatomical, functional, diffusion, etc)
  ☆107Updated 2 weeks ago
• neuronets / nobrainer
  A framework for developing neural network models for 3D image processing.
  ☆167Updated last month
• nipreps / smriprep
  Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)
  ☆161Updated last week
• PennLINC / qsiprep
  Preprocessing of diffusion MRI
  ☆171Updated last month
• nipreps / dmriprep
  dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…
  ☆73Updated 2 months ago
• wwu-mmll / deepmriprep
  Neural network-based MRI preprocessing: Prep 🧠 images in seconds 🔥
  ☆44Updated last month
• rordenlab / niimath
  niimath - a clone of fslmaths. Try the live demo:
  ☆71Updated 2 months ago
• nipreps / nibabies
  fMRIPrep Lifespan - A robust, transparent workflow tailored for neonate and infant MRI
  ☆37Updated this week
• bids-apps / freesurfer
  BIDS app wrapping recon-all from FreeSurfer
  ☆44Updated 3 weeks ago
• neurolabusc / Clinical
  Clinical Toolbox for SPM (https://www.nitrc.org/projects/clinicaltbx/)
  ☆47Updated 4 years ago
• Conxz / multiBrain
  A list of brain imaging datasets with multiple scans per subject. Feel free to update the list via 'pull requests'!
  ☆100Updated 9 months ago
• johncolby / along-tract-stats
  A MATLAB toolbox for performing along-tract analysis of diffusion tensor imaging (DTI) MRI tractography data.
  ☆49Updated 12 years ago
• CoBrALab / MAGeTbrain
  Multiple Automatically Generated Templates brain segmentation algorithm
  ☆50Updated last year
• neurospin / pypreprocess
  Preprocessing scripts for neuro imaging
  ☆110Updated 2 years ago
• scilus / scilpy
  The Sherbrooke Connectivity Imaging Lab (SCIL) Python dMRI processing toolbox
  ☆84Updated this week
• yeatmanlab / AFQ
  Automated Fiber Quantification
  ☆77Updated last year
• nighres / nighres
  Processing tools for high-resolution neuroimaging
  ☆73Updated 3 weeks ago
• Deep-MI / BrainPrint-legacy
  Python scripts for shape analysis of neuroimaging data (wrapping around shapeDNA and FreeSurfer)
  ☆21Updated 4 years ago
• nipreps / mriqc
  Automated Quality Control and visual reports for Quality Assessment of structural (T1w, T2w) and functional MRI of the brain
  ☆342Updated last month
• nipreps / sdcflows
  Susceptibility Distortion Correction (SDC) workflows for EPI MR schemes
  ☆43Updated 2 weeks ago
• SlicerDMRI / whitematteranalysis
  White matter tractography clustering and more...
  ☆79Updated 6 months ago
• poldracklab / pydeface
  defacing utility for MRI images
  ☆131Updated last year
• volBrain / AssemblyNet
  AssemblyNet: 3D Whole Brain MRI segmentation pipeline
  ☆68Updated 2 years ago
• frankyeh / DSI-Studio
  A Tractography Tool for Diffusion MRI
  ☆151Updated last month
• Deep-MI / fsqc
  A set of quality control scripts for FreeSurfer- and FastSurfer-processed structural MRI data
  ☆73Updated 3 weeks ago
• MASILab / Synb0-DISCO
  Distortion correction of diffusion weighted MRI without reverse phase-encoding scans or field-maps
  ☆82Updated 5 months ago
• BIC-MNI / minc-toolkit-v2
  Version 2 of the minc-toolkit, uses tools based on ITK version 4.x
  ☆53Updated 7 months ago
• razvanmarinescu / brain-coloring
  BrainPainter - Brain Visualisation Software
  ☆70Updated 2 years ago
• cMadan / openMorph
  Curated list of open-access databases with human structural MRI data
  ☆129Updated 6 years ago