CBICA / BrainMaGeLinks
Brain extraction in presence of abnormalities, using single and multiple MRI modalities
☆37Updated 10 months ago
Alternatives and similar repositories for BrainMaGe
Users that are interested in BrainMaGe are comparing it to the libraries listed below
Sorting:
- Code to preprocess, segment, and fuse glioma MRI scans based on the BraTS Toolkit manuscript.☆99Updated 4 months ago
- RadQy is a quality assurance and checking tool for quantitative assessment of magnetic resonance imaging (MRI) and computed tomography (C…☆110Updated 6 months ago
- Brain CT image segmentation, normalisation, skull-stripping and total brain/intracranial volume computation.☆84Updated last month
- A space to log issues, updates, and software related to the ATLAS (Anatomical Tracings of Lesions After Stroke) database.☆84Updated 3 years ago
- Automated deep-learning based brain extraction applicable to a broad range of MRI sequence types and with robust performance even in the …☆39Updated 4 years ago
- Automated deep-learning based brain tumor segmentation on MRI☆37Updated 3 years ago
- This repository contains the code used for the paper "Towards automated brain aneurysm detection in TOF-MRA: open data, weak labels, and …☆38Updated 2 years ago
- A project to provide custom sorting and renaming of dicom files☆85Updated 9 months ago
- Preprocessing pipeline on Brain MR Images through FSL and ANTs, including registration, skull-stripping, bias field correction, enhanceme…☆209Updated 7 years ago
- Robust Brain Extraction Tool for CT Head Images☆51Updated 5 years ago
- Example docker containers for the WMH Segmentation Challenge☆22Updated 5 years ago
- Pre-trained models and utilities for deep learning on medical images in Python (Keras/TensorFlow)☆247Updated this week
- NiftyMIC is a research-focused toolkit for motion correction and volumetric image reconstruction of 2D ultra-fast MRI.☆160Updated 3 years ago
- A UNet for the analysis of perfusion CT imaging in the setting of acute ischemic stroke.☆17Updated 9 months ago
- An AI-powered open-source medical image analysis toolbox☆73Updated last year
- Docker for running stroke lesion core segmentation☆30Updated 5 years ago
- The easiest tool for experimenting with radiomics features.☆41Updated last year
- Brain Extraction Tool in Python☆43Updated 10 months ago
- Workflow for Optimal Radiomics Classification☆81Updated last month
- The project is used to do preprocessing on brain MR images by using Nipype.☆40Updated last year
- TF2.3 DCE-/DSC-MRI processing code, collected, tested and made available to all.☆40Updated 5 months ago
- A framework for joint super-resolution and image synthesis, without requiring real training data☆180Updated last year
- Precision medicine toolbox☆69Updated last year
- Example download scripts for the OASIS3 project☆169Updated 4 months ago
- Automatic Segmentation of Vestibular Schwannoma with MONAI (PyTorch)☆52Updated last month
- DeepBleed: 3D Volumetric Intracranial Hemorrhage Segmentation for Clinical Trials☆29Updated 2 years ago
- Automated processing of MRI in neuro-oncology (combining HD-BET, image co-registration, and HD-GLIO in one container)☆33Updated 3 years ago
- Framework for the reproducible processing of neuroimaging data with deep learning methods☆178Updated last week
- Library for generating images by sampling a GMM conditioned on label maps☆27Updated last year
- Deep Whole Brain Segmentation Using SLANT Method☆129Updated 2 years ago