CBICA / BrainMaGeLinks
Brain extraction in presence of abnormalities, using single and multiple MRI modalities
☆38Updated 10 months ago
Alternatives and similar repositories for BrainMaGe
Users that are interested in BrainMaGe are comparing it to the libraries listed below
Sorting:
- Code to preprocess, segment, and fuse glioma MRI scans based on the BraTS Toolkit manuscript.☆99Updated 4 months ago
- This repository contains the code used for the paper "Towards automated brain aneurysm detection in TOF-MRA: open data, weak labels, and …☆38Updated 2 years ago
- RadQy is a quality assurance and checking tool for quantitative assessment of magnetic resonance imaging (MRI) and computed tomography (C…☆110Updated 6 months ago
- Automated deep-learning based brain tumor segmentation on MRI☆37Updated 3 years ago
- Brain CT image segmentation, normalisation, skull-stripping and total brain/intracranial volume computation.☆84Updated last month
- A space to log issues, updates, and software related to the ATLAS (Anatomical Tracings of Lesions After Stroke) database.☆84Updated 3 years ago
- A project to provide custom sorting and renaming of dicom files☆85Updated 9 months ago
- Robust Brain Extraction Tool for CT Head Images☆51Updated 5 years ago
- Automated deep-learning based brain extraction applicable to a broad range of MRI sequence types and with robust performance even in the …☆39Updated 4 years ago
- Lesion and prostate masks for the PROSTATEx training dataset, after a lesion-by-lesion quality check.☆89Updated 3 years ago
- Precision medicine toolbox☆69Updated last year
- A UNet for the analysis of perfusion CT imaging in the setting of acute ischemic stroke.☆17Updated 9 months ago
- Automatic Segmentation of Vestibular Schwannoma with MONAI (PyTorch)☆52Updated last month
- ☆42Updated 2 years ago
- Software for automatic segmentation and generation of standardized clinical reports of brain tumors from MRI volumes☆42Updated 3 weeks ago
- Docker for running stroke lesion core segmentation☆30Updated 5 years ago
- TF2.3 DCE-/DSC-MRI processing code, collected, tested and made available to all.☆40Updated 5 months ago
- Workflow for Optimal Radiomics Classification☆81Updated last month
- DICOM RT-Struct to mask☆103Updated last year
- The easiest tool for experimenting with radiomics features.☆41Updated last year
- Transparent and reproducible medical image processing pipelines in Python.☆56Updated last week
- Pre-trained models and utilities for deep learning on medical images in Python (Keras/TensorFlow)☆247Updated this week
- BOA is a segmentation tool of CT scans by the SHIP-AI group (https://ship-ai.ikim.nrw/). Combining the TotalSegmentator and the Body Comp…☆59Updated 3 months ago
- Medical Image Radiomics Processor☆76Updated this week
- ☆61Updated last year
- Deep Learning tools for brain medical images☆142Updated last year
- 3D-Unet: patched based Pytorch implementation for medical images segmentation☆62Updated 4 years ago
- A Foundational Keypoint Model for Robust and Flexible Brain MRI Registration☆53Updated 6 months ago
- Automated processing of MRI in neuro-oncology (combining HD-BET, image co-registration, and HD-GLIO in one container)☆33Updated 3 years ago
- A deep learning framework for automated analysis of body composition from abdominal CT☆19Updated last year