CBICA / BrainMaGe
Brain extraction in presence of abnormalities, using single and multiple MRI modalities
☆34Updated last year
Alternatives and similar repositories for BrainMaGe:
Users that are interested in BrainMaGe are comparing it to the libraries listed below
- Automated deep-learning based brain tumor segmentation on MRI☆28Updated 2 years ago
- Brain CT image segmentation, normalisation, skull-stripping and total brain/intracranial volume computation.☆70Updated 7 months ago
- RadQy is a quality assurance and checking tool for quantitative assessment of magnetic resonance imaging (MRI) and computed tomography (C…☆97Updated last week
- Automated deep-learning based brain extraction applicable to a broad range of MRI sequence types and with robust performance even in the …☆34Updated 3 years ago
- Automated processing of MRI in neuro-oncology (combining HD-BET, image co-registration, and HD-GLIO in one container)☆27Updated 2 years ago
- DeepBleed: 3D Volumetric Intracranial Hemorrhage Segmentation for Clinical Trials☆26Updated last year
- Docker for running stroke lesion core segmentation☆11Updated 6 years ago
- A UNet for the analysis of perfusion CT imaging in the setting of acute ischemic stroke.☆15Updated 7 months ago
- ICH Segmentation of CT scans☆26Updated last month
- Automatic Segmentation of Vestibular Schwannoma with MONAI (PyTorch)☆47Updated last year
- A project to provide custom sorting and renaming of dicom files☆77Updated 8 months ago
- Robust Brain Extraction Tool for CT Head Images☆45Updated 4 years ago
- A space to log issues, updates, and software related to the ATLAS (Anatomical Tracings of Lesions After Stroke) database.☆81Updated 2 years ago
- DICOM RT-Struct to mask☆101Updated last year
- This repository contains the code used for the paper "Towards automated brain aneurysm detection in TOF-MRA: open data, weak labels, and …☆30Updated 2 years ago
- RadTract: enhanced tractometry with radiomics-based imaging biomarkers for improved predictive modelling.☆11Updated 8 months ago
- ☆33Updated last year
- LST-AI - Deep Learning Ensemble for Accurate MS Lesion Segmentation☆29Updated 3 months ago
- A re-implementation of FSL's Brain Extraction Tool in Python☆40Updated 7 months ago
- A Foundational Keypoint Model for Robust and Flexible Brain MRI Registration☆40Updated 8 months ago
- This is a complete guide on how to do Pyradiomics based feature extraction and then, build a model to calculate the grade of glioma.☆25Updated 4 years ago
- BOA is a segmentation tool of CT scans by the SHIP-AI group (https://ship-ai.ikim.nrw/). Combining the TotalSegmentator and the Body Comp…☆32Updated 5 months ago
- Code to preprocess, segment, and fuse glioma MRI scans based on the BraTS Toolkit manuscript.☆86Updated 5 months ago
- TF2.3 DCE-/DSC-MRI processing code, collected, tested and made available to all.☆36Updated 3 weeks ago
- ☆25Updated 10 months ago
- Software for automatic segmentation and generation of standardized clinical reports of brain tumors from MRI volumes☆37Updated last month
- 3D-Unet: patched based Pytorch implementation for medical images segmentation☆63Updated 3 years ago
- Workflow for Optimal Radiomics Classification☆74Updated 2 weeks ago
- Lesion and prostate masks for the PROSTATEx training dataset, after a lesion-by-lesion quality check.☆82Updated 2 years ago
- An AI-powered open-source medical image analysis toolbox☆63Updated 7 months ago