BrainLesion / preprocessingLinks
preprocessing tools for multi-modal 3D brain imaging
☆28Updated 3 weeks ago
Alternatives and similar repositories for preprocessing
Users that are interested in preprocessing are comparing it to the libraries listed below
Sorting:
- Code to preprocess, segment, and fuse glioma MRI scans based on the BraTS Toolkit manuscript.☆94Updated last month
- Workflow for Optimal Radiomics Classification☆78Updated 3 months ago
- MICCAI Ischemic Stroke LEsion Segmentation 2022 Top 3 Major Voting Ensemble☆25Updated 11 months ago
- Medical Image Radiomics Processor☆73Updated this week
- Brain extraction in presence of abnormalities, using single and multiple MRI modalities☆36Updated 7 months ago
- Providing top-performing algorithms from the Brain Tumor Segmentation (BraTS) challenges.☆48Updated last week
- Resurces for MRI images processing and deep learning in 3D☆144Updated 3 years ago
- BOA is a segmentation tool of CT scans by the SHIP-AI group (https://ship-ai.ikim.nrw/). Combining the TotalSegmentator and the Body Comp…☆54Updated last week
- Precision medicine toolbox☆70Updated last year
- Transparent and reproducible medical image processing pipelines in Python.☆52Updated 3 weeks ago
- Computed tomography to body composition (Comp2Comp).☆98Updated 2 months ago
- ☆111Updated last month
- Pretrained neural networks for UK Biobank brain MRI images. SFCN, 3D-ResNet etc.☆162Updated last year
- ☆42Updated last year
- DICOM RT-Struct to mask☆102Updated last year
- MRI brain extraction tool☆373Updated 10 months ago
- Processing Library and Analysis Toolkit for Medical Imaging in Python☆139Updated 5 months ago
- End-to-end Python CT volume preprocessing pipeline to convert raw DICOMs into clean 3D numpy arrays for ML. From paper Draelos et al. "Ma…☆72Updated 5 years ago
- Neural Pre Processing is an end-to-end weakly supervised learning approach for converting raw head MRI images to intensity-normalized, sk…☆30Updated last year
- An AI-powered open-source medical image analysis toolbox☆68Updated last year
- A 3D Slicer extension for efficient segmentation with nnInteractive.☆113Updated last week
- Faking_it team! BraTS submissions.☆54Updated 3 months ago
- Hand-crafted radiomics and deep learning-based radiomcis features extraction.☆88Updated 3 years ago
- Preprocessing pipeline on Brain MR Images through FSL and ANTs, including registration, skull-stripping, bias field correction, enhanceme…☆208Updated 7 years ago
- Framework for the reproducible processing of neuroimaging data with deep learning methods☆174Updated last month
- Brain Segmentation with MONAI and Dynamic Unet (nn-unet)☆36Updated 2 months ago
- Brain CT image segmentation, normalisation, skull-stripping and total brain/intracranial volume computation.☆79Updated last year
- The easiest tool for experimenting with radiomics features.☆41Updated last year
- Ischemic stroke segmentation tool.☆79Updated 3 months ago
- [Nature Machine Intelligence 2024] Code and evaluation repository for the paper☆127Updated 8 months ago