Alternatives and similar repositories for BraTS

Users that are interested in BraTS are comparing it to the libraries listed below

• Tabrisrei / ISLES22_Ensemble
  MICCAI Ischemic Stroke LEsion Segmentation 2022 Top 3 Major Voting Ensemble
  ☆24Updated 10 months ago
• neuronflow / BraTS-Toolkit
  Code to preprocess, segment, and fuse glioma MRI scans based on the BraTS Toolkit manuscript.
  ☆91Updated last week
• ShadowTwin41 / BraTS_2023_2024_solutions
  Faking_it team! BraTS submissions.
  ☆50Updated 2 months ago
• MIC-DKFZ / nnssl
  ☆91Updated last month
• Jingnan-Jia / segmentation_metrics
  A package to compute medical segmentation metrics.
  ☆173Updated last year
• quqixun / BrainPrep
  Preprocessing pipeline on Brain MR Images through FSL and ANTs, including registration, skull-stripping, bias field correction, enhanceme…
  ☆207Updated 7 years ago
• ezequieldlrosa / isles22
  ☆42Updated last year
• ezequieldlrosa / DeepIsles
  Ischemic stroke segmentation tool.
  ☆76Updated last month
• fitushar / 3D-Medical-Imaging-Preprocessing-All-you-need
  This Repo Will contain the Preprocessing Code for 3D Medical Imaging
  ☆212Updated 5 years ago
• rcuocolo / PROSTATEx_masks
  Lesion and prostate masks for the PROSTATEx training dataset, after a lesion-by-lesion quality check.
  ☆87Updated 3 years ago
• connectomicslab / Aneurysm_Detection
  This repository contains the code used for the paper "Towards automated brain aneurysm detection in TOF-MRA: open data, weak labels, and …
  ☆37Updated 2 years ago
• bwittmann / vesselFM
  A foundation model for universal 3D blood vessel segmentation. Paper accepted @ CVPR25.
  ☆112Updated 4 months ago
• rachellea / ct-volume-preprocessing
  End-to-end Python CT volume preprocessing pipeline to convert raw DICOMs into clean 3D numpy arrays for ML. From paper Draelos et al. "Ma…
  ☆72Updated 4 years ago
• BrainLesion / preprocessing
  preprocessing tools for multi-modal 3D brain imaging
  ☆21Updated last month
• KCL-BMEIS / VS_Seg
  Automatic Segmentation of Vestibular Schwannoma with MONAI (PyTorch)
  ☆50Updated last year
• antonioguj / bronchinet
  Airway segmentation from chest CTs using deep Convolutional Neural Networks
  ☆71Updated last year
• m1balcerak / GliODIL
  Official repository for "Glioma Radiotherapy Design by Optimization of a Data and Physics Informed Discrete Loss" (Nature Communications …
  ☆30Updated this week
• mazurowski-lab / SegmentAnyBone
  SegmentAnyBone: A Universal Model that Segments Any Bone at Any Location on MRI
  ☆110Updated 9 months ago
• StanfordMIMI / Comp2Comp
  Computed tomography to body composition (Comp2Comp).
  ☆94Updated 3 weeks ago
• DIAGNijmegen / picai_labels
  Annotations for the PI-CAI Challenge: Public Training and Development Dataset
  ☆62Updated 3 months ago
• giesekow / deepvesselnet
  Implementation of the DeepVesselNet deep learning network
  ☆152Updated 2 years ago
• hhaentze / MRSegmentator
  ☆139Updated last month
• BBillot / SynthSeg
  Contrast-agnostic segmentation of MRI scans
  ☆485Updated last year
• mattiaspaul / deedsBCV
  new and more efficient version for 3D discrete deformable registration, reaching the highest accuracy in several benchmarks
  ☆115Updated 3 weeks ago
• RichardObi / medigan
  medigan - A Python Library of Pretrained Generative Models for Medical Image Synthesis
  ☆184Updated last year
• ENHANCE-PET / MOOSE
  MOOSE (Multi-organ objective segmentation) a data-centric AI solution that generates multilabel organ segmentations to facilitate systemi…
  ☆269Updated last week
• iitzco / deepbrain
  Deep Learning tools for brain medical images
  ☆139Updated last year
• neheller / kits23
  The official repository of the 2023 Kidney Tumor Segmentation Challenge (KiTS23)
  ☆121Updated last month
• MECLabTUDA / Lifelong-nnUNet
  ☆150Updated 2 weeks ago
• Chin-Fu-Liu / Acute-stroke_Detection_Segmentation
  ☆28Updated last year