Alternatives and similar repositories for BraTS

Users that are interested in BraTS are comparing it to the libraries listed below

• Tabrisrei / ISLES22_Ensemble
  MICCAI Ischemic Stroke LEsion Segmentation 2022 Top 3 Major Voting Ensemble
  ☆22Updated 9 months ago
• rcuocolo / PROSTATEx_masks
  Lesion and prostate masks for the PROSTATEx training dataset, after a lesion-by-lesion quality check.
  ☆84Updated 3 years ago
• neuronflow / BraTS-Toolkit
  Code to preprocess, segment, and fuse glioma MRI scans based on the BraTS Toolkit manuscript.
  ☆91Updated 11 months ago
• ShadowTwin41 / BraTS_2023_2024_solutions
  Faking_it team! BraTS submissions.
  ☆46Updated last month
• StanfordMIMI / Comp2Comp
  Computed tomography to body composition (Comp2Comp).
  ☆91Updated 2 weeks ago
• ezequieldlrosa / DeepIsles
  Ischemic stroke segmentation tool.
  ☆73Updated 3 weeks ago
• MIC-DKFZ / nnssl
  ☆84Updated last month
• Sikerdebaard / dcmrtstruct2nii
  DICOM RT-Struct to mask
  ☆101Updated last year
• KCL-BMEIS / VS_Seg
  Automatic Segmentation of Vestibular Schwannoma with MONAI (PyTorch)
  ☆50Updated last year
• paul-ang / aps-deep-learning-framework
  ISBI2022: An Improved Deep Learning Framework for MR-to-CT Image Synthesis with a New Hybrid Objective Function.
  ☆12Updated 3 years ago
• mattiaspaul / deedsBCV
  new and more efficient version for 3D discrete deformable registration, reaching the highest accuracy in several benchmarks
  ☆113Updated last year
• ezequieldlrosa / isles22
  ☆42Updated last year
• antonioguj / bronchinet
  Airway segmentation from chest CTs using deep Convolutional Neural Networks
  ☆66Updated last year
• quqixun / BrainPrep
  Preprocessing pipeline on Brain MR Images through FSL and ANTs, including registration, skull-stripping, bias field correction, enhanceme…
  ☆207Updated 7 years ago
• Jingnan-Jia / segmentation_metrics
  A package to compute medical segmentation metrics.
  ☆173Updated last year
• dalcalab / voxel
  Torch utilities for 3D medical imaging
  ☆48Updated this week
• MECLabTUDA / Lifelong-nnUNet
  ☆150Updated 2 months ago
• fitushar / 3D-Medical-Imaging-Preprocessing-All-you-need
  This Repo Will contain the Preprocessing Code for 3D Medical Imaging
  ☆207Updated 5 years ago
• Chin-Fu-Liu / Acute-stroke_Detection_Segmentation
  ☆27Updated last year
• bwittmann / vesselFM
  A foundation model for universal 3D blood vessel segmentation. Paper accepted @ CVPR25.
  ☆103Updated 2 months ago
• rachellea / ct-volume-preprocessing
  End-to-end Python CT volume preprocessing pipeline to convert raw DICOMs into clean 3D numpy arrays for ML. From paper Draelos et al. "Ma…
  ☆72Updated 4 years ago
• AIM-Harvard / foundation-cancer-image-biomarker
  [Nature Machine Intelligence 2024] Code and evaluation repository for the paper
  ☆121Updated 5 months ago
• voreille / hecktor
  ☆81Updated 2 years ago
• giesekow / deepvesselnet
  Implementation of the DeepVesselNet deep learning network
  ☆151Updated 2 years ago
• aqqush / CT_BET
  Robust Brain Extraction Tool for CT Head Images
  ☆46Updated 4 years ago
• ENHANCE-PET / MOOSE
  MOOSE (Multi-organ objective segmentation) a data-centric AI solution that generates multilabel organ segmentations to facilitate systemi…
  ☆264Updated last week
• CBICA / BrainMaGe
  Brain extraction in presence of abnormalities, using single and multiple MRI modalities
  ☆36Updated 5 months ago
• davidiommi / Pytorch-Unet3D-single_channel
  3D-Unet: patched based Pytorch implementation for medical images segmentation
  ☆63Updated 3 years ago
• MIC-DKFZ / LesionLocator
  LesionLocator is a framework for zero-shot lesion segmentation and longitudinal tumor tracking in 3D full-body imaging.
  ☆66Updated 2 weeks ago
• JunMa11 / AbdomenCT-1K
  The official repository of "AbdomenCT-1K: Is Abdominal Organ Segmentation A Solved Problem?"
  ☆252Updated last year