Alternatives and similar repositories for BraTS

Users that are interested in BraTS are comparing it to the libraries listed below

• Tabrisrei / ISLES22_Ensemble
  MICCAI Ischemic Stroke LEsion Segmentation 2022 Top 3 Major Voting Ensemble
  ☆22Updated 7 months ago
• neuronflow / BraTS-Toolkit
  Code to preprocess, segment, and fuse glioma MRI scans based on the BraTS Toolkit manuscript.
  ☆86Updated 9 months ago
• ShadowTwin41 / BraTS_2023_2024_solutions
  Faking_it team! BraTS submissions.
  ☆38Updated last week
• rcuocolo / PROSTATEx_masks
  Lesion and prostate masks for the PROSTATEx training dataset, after a lesion-by-lesion quality check.
  ☆83Updated 2 years ago
• MIC-DKFZ / nnssl
  ☆50Updated last month
• Novestars / Neural_Pre_Processing
  Neural Pre Processing is an end-to-end weakly supervised learning approach for converting raw head MRI images to intensity-normalized, sk…
  ☆27Updated last year
• KCL-BMEIS / VS_Seg
  Automatic Segmentation of Vestibular Schwannoma with MONAI (PyTorch)
  ☆50Updated last year
• CBICA / BrainMaGe
  Brain extraction in presence of abnormalities, using single and multiple MRI modalities
  ☆36Updated 3 months ago
• mazurowski-lab / SegmentAnyBone
  SegmentAnyBone: A Universal Model that Segments Any Bone at Any Location on MRI
  ☆89Updated 6 months ago
• ysuter / gbm-data-longitudinal
  This repository contains code used to prepare the LUMIERE Glioblastoma dataset.
  ☆26Updated last year
• Chin-Fu-Liu / Acute-stroke_Detection_Segmentation
  ☆27Updated last year
• aqqush / CT_BET
  Robust Brain Extraction Tool for CT Head Images
  ☆46Updated 4 years ago
• GSTT-CSC / TotalSegmentator-AIDE
  TotalSegmentator packaged as an AIDE Application, based on the MONAI Application Package (MAP) standard.
  ☆26Updated last year
• MECLabTUDA / Lifelong-nnUNet
  ☆149Updated 9 months ago
• dalcalab / voxel
  Torch utilities for 3D medical imaging
  ☆45Updated 2 months ago
• MS-PINPOINT / mindGlide
  Brain Segmentation with MONAI and Dynamic Unet (nn-unet)
  ☆27Updated 5 months ago
• rachellea / ct-volume-preprocessing
  End-to-end Python CT volume preprocessing pipeline to convert raw DICOMs into clean 3D numpy arrays for ML. From paper Draelos et al. "Ma…
  ☆69Updated 4 years ago
• DIAGNijmegen / picai_labels
  Annotations for the PI-CAI Challenge: Public Training and Development Dataset
  ☆58Updated last month
• qurit-frizi / TMTV-Net
  This repository employs a deep-learning method for the automated segmentation of total metabolic tumor volume (TMTV) in whole-body [18]F-…
  ☆23Updated 3 months ago
• paul-ang / aps-deep-learning-framework
  ISBI2022: An Improved Deep Learning Framework for MR-to-CT Image Synthesis with a New Hybrid Objective Function.
  ☆12Updated 3 years ago
• UMEssen / SALT
  Softmax for Arbitrary Label Trees (SALT) is a framework for training segmentation networks using conditional probabilities to model hiera…
  ☆80Updated 8 months ago
• Sikerdebaard / dcmrtstruct2nii
  DICOM RT-Struct to mask
  ☆101Updated last year
• bwittmann / vesselFM
  A foundation model for universal 3D blood vessel segmentation. Paper accepted @ CVPR25.
  ☆81Updated 3 weeks ago
• WCHN / CTseg
  Brain CT image segmentation, normalisation, skull-stripping and total brain/intracranial volume computation.
  ☆73Updated 11 months ago
• StanfordMIMI / Comp2Comp
  Computed tomography to body composition (Comp2Comp).
  ☆86Updated last month
• OscarPellicer / prostate_lesion_detection
  Model for the detection, segmentation, and classification of prostate lesions from mpMRI, using ProstateX data and Retina U-Net
  ☆68Updated 3 years ago
• ezequieldlrosa / isles22
  ☆39Updated 10 months ago
• davidiommi / Pytorch-Unet3D-single_channel
  3D-Unet: patched based Pytorch implementation for medical images segmentation
  ☆63Updated 3 years ago
• BBillot / lab2im
  Library for generating images by sampling a GMM conditioned on label maps
  ☆25Updated last year
• primakov / precision-medicine-toolbox
  Precision medicine toolbox
  ☆70Updated last year