Alternatives and similar repositories for LST-AI

Users that are interested in LST-AI are comparing it to the libraries listed below

• MIC-DKFZ / radtract
  RadTract: enhanced tractometry with radiomics-based imaging biomarkers for improved predictive modelling.
  ☆13Updated 5 months ago
• MS-PINPOINT / mindGlide
  Brain Segmentation with MONAI and Dynamic Unet (nn-unet)
  ☆37Updated 2 months ago
• NYU-DiffusionMRI / DESIGNER-v2
  Diffusion parameter EStImation with Gibbs and NoisE Removal pipeline Version 2
  ☆31Updated this week
• volBrain / AssemblyNet
  AssemblyNet: 3D Whole Brain MRI segmentation pipeline
  ☆70Updated 2 years ago
• ANTsX / ANTsPyNet
  Pre-trained models and utilities for deep learning on medical images in Python (Keras/TensorFlow)
  ☆247Updated this week
• ha-ha-ha-han / UKBiobank_deep_pretrain
  Pretrained neural networks for UK Biobank brain MRI images. SFCN, 3D-ResNet etc.
  ☆169Updated last year
• BBillot / SynthSR
  A framework for joint super-resolution and image synthesis, without requiring real training data
  ☆180Updated last year
• AICONSlab / SynthSegCSVD
  CNN-based segmentation tool for segmenting PVS on T1 and WMH on FLAIR MRI
  ☆13Updated 10 months ago
• SlicerDMRI / whitematteranalysis
  White matter tractography clustering and more...
  ☆80Updated 7 months ago
• Jfortin1 / ComBatHarmonization
  Harmonization of multi-site imaging data with ComBat
  ☆322Updated 2 years ago
• pnlbwh / conversion
  Various mri conversion/modification scripts
  ☆22Updated 3 weeks ago
• pboutinaud / SHIVA_PVS
  Perivascular (PVS) or Virchow–Robin Spaces (VRS) segmentation with a 3D Unet
  ☆35Updated last year
• Medical-Image-Analysis-Laboratory / FetalSynthSeg
  FetalSynthSeg Code
  ☆15Updated 10 months ago
• Deep-MI / LIT
  FastSurfer Lesion Inpainting Tool (FastSurfer-LIT) for lesion inpainting e.g. for whole brain segmentation and cortical surface reconstru…
  ☆18Updated last week
• MASILab / cornn_tractography
  Convolutional-recurrent neural networks approximate diffusion tractography from T1-weighted MRI and associated anatomical context
  ☆21Updated 6 months ago
• vanandrew / brainextractor
  Brain Extraction Tool in Python
  ☆43Updated 10 months ago
• WCHN / CTseg
  Brain CT image segmentation, normalisation, skull-stripping and total brain/intracranial volume computation.
  ☆84Updated last month
• vishnubashyam / DeepBrainNet
  Convolutional Neural Network trained for age prediction using a large (n=11,729) set of MRI scans from a highly diversified cohort spanni…
  ☆58Updated 5 years ago
• yu02019 / BEN
  ☆31Updated last year
• MIC-DKFZ / TractSeg
  Automatic White Matter Bundle Segmentation
  ☆253Updated 2 years ago
• CCI-Bonn / HD-BET
  Automated deep-learning based brain extraction applicable to a broad range of MRI sequence types and with robust performance even in the …
  ☆39Updated 4 years ago
• FiRMLAB-Pisa / pySynthMRI
  PysynthMRI is a python open-source tool which provides a user-friendly interface to synthesize contrast weighted images.
  ☆25Updated 2 months ago
• MIDIconsortium / BrainAge
  ☆44Updated last year
• MIC-DKFZ / HD-BET
  MRI brain extraction tool
  ☆395Updated last year
• AthenaEPI / dmipy
  The open source toolbox for reproducible diffusion MRI-based microstructure estimation
  ☆115Updated last year
• hufsaim / pvsseg
  perivascular space segmentation
  ☆17Updated 3 years ago
• viswanath-lab / RadQy
  RadQy is a quality assurance and checking tool for quantitative assessment of magnetic resonance imaging (MRI) and computed tomography (C…
  ☆110Updated 6 months ago
• Jfortin1 / neuroCombat
  Harmonization of multi-site imaging data with ComBat (Python)
  ☆162Updated 2 years ago
• BioMedIA / dhcp-structural-pipeline
  structural analysis of neonatal brain MRI scans
  ☆59Updated 4 years ago
• npnl / ATLAS
  A space to log issues, updates, and software related to the ATLAS (Anatomical Tracings of Lesions After Stroke) database.
  ☆84Updated 3 years ago