Alternatives and similar repositories for BraTS-Toolkit:

Users that are interested in BraTS-Toolkit are comparing it to the libraries listed below

• Jingnan-Jia / segmentation_metrics
  A package to compute medical segmentation metrics.
  ☆149Updated 7 months ago
• fitushar / 3D-Medical-Imaging-Preprocessing-All-you-need
  This Repo Will contain the Preprocessing Code for 3D Medical Imaging
  ☆198Updated 4 years ago
• MStarmans91 / WORC
  Workflow for Optimal Radiomics Classification
  ☆73Updated 3 weeks ago
• Sikerdebaard / dcmrtstruct2nii
  DICOM RT-Struct to mask
  ☆99Updated 11 months ago
• BrainLesion / preprocessing
  preprocessing tools for multi-modal 3D brain MRI
  ☆18Updated last week
• CBICA / BrainMaGe
  Brain extraction in presence of abnormalities, using single and multiple MRI modalities
  ☆33Updated last year
• aqqush / CT_BET
  Robust Brain Extraction Tool for CT Head Images
  ☆45Updated 4 years ago
• project-lighter / lighter
  Streamline deep learning experiments using config files
  ☆35Updated last week
• JZK00 / Radiomics-Features-Extractor
  Hand-crafted radiomics and deep learning-based radiomcis features extraction.
  ☆81Updated 2 years ago
• primakov / precision-medicine-toolbox
  Precision medicine toolbox
  ☆69Updated 10 months ago
• DIAGNijmegen / picai_labels
  Annotations for the PI-CAI Challenge: Public Training and Development Dataset
  ☆56Updated 5 months ago
• davidiommi / Pytorch-Unet3D-single_channel
  3D-Unet: patched based Pytorch implementation for medical images segmentation
  ☆63Updated 3 years ago
• andreped / livermask
  💥 Command line tool for automatic liver parenchyma and liver vessel segmentation in CT using a pretrained deep learning model
  ☆66Updated 4 months ago
• WCHN / CTseg
  Brain CT image segmentation, normalisation, skull-stripping and total brain/intracranial volume computation.
  ☆69Updated 6 months ago
• rachellea / ct-volume-preprocessing
  End-to-end Python CT volume preprocessing pipeline to convert raw DICOMs into clean 3D numpy arrays for ML. From paper Draelos et al. "Ma…
  ☆60Updated 4 years ago
• voreille / hecktor
  ☆76Updated last year
• neheller / kits23
  The official repository of the 2023 Kidney Tumor Segmentation Challenge (KiTS23)
  ☆92Updated 11 months ago
• davidiommi / Pytorch--3D-Medical-Images-Segmentation--SALMON
  Segmentation deep learning ALgorithm based on MONai toolbox: single and multi-label segmentation software developed by QIMP team-Vienna.
  ☆121Updated 3 years ago
• rcuocolo / PROSTATEx_masks
  Lesion and prostate masks for the PROSTATEx training dataset, after a lesion-by-lesion quality check.
  ☆80Updated 2 years ago
• GSTT-CSC / TotalSegmentator-AIDE
  TotalSegmentator packaged as an AIDE Application, based on the MONAI Application Package (MAP) standard.
  ☆24Updated last year
• kondratevakate / mri-deep-learning-tools
  Resurces for MRI images processing and deep learning in 3D
  ☆133Updated 2 years ago
• SimpleITK / TUTORIAL
  ☆108Updated 2 weeks ago
• antonioguj / bronchinet
  Airway segmentation from chest CTs using deep Convolutional Neural Networks
  ☆66Updated 8 months ago
• BrainLesion / BraTS
  Providing top performing algorithms from the Brain Tumor Segmentation (BraTS) challenges.
  ☆13Updated last month
• oncoray / mirp
  Medical Image Radiomics Processor
  ☆60Updated last week
• faizan1234567 / Brain-Tumors-Segmentation
  Multimodal Brain mpMRI segmentation on BraTS 2023 and BraTS 2021 datasets.
  ☆68Updated this week
• Novestars / Neural_Pre_Processing
  Neural Pre Processing is an end-to-end weakly supervised learning approach for converting raw head MRI images to intensity-normalized, sk…
  ☆26Updated last year
• DIAGNijmegen / prostateMR_3D-CAD-csPCa
  Hierarchical probabilistic 3D U-Net, with attention mechanisms (—𝘈𝘵𝘵𝘦𝘯𝘵𝘪𝘰𝘯 𝘜-𝘕𝘦𝘵, 𝘚𝘌𝘙𝘦𝘴𝘕𝘦𝘵) and a nested decoder str…
  ☆40Updated 3 years ago
• StanfordMIMI / Comp2Comp
  Computed tomography to body composition (Comp2Comp).
  ☆70Updated last month
• ezequieldlrosa / isles22
  ☆34Updated 6 months ago