Code to preprocess, segment, and fuse glioma MRI scans based on the BraTS Toolkit manuscript.
☆102Sep 23, 2025Updated 7 months ago
Alternatives and similar repositories for BraTS-Toolkit
Users that are interested in BraTS-Toolkit are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- preprocessing tools for multi-modal 3D brain imaging☆31Apr 24, 2026Updated last week
- A napari plugin for counting organoids from brightfield microscopy images with deep learning☆14Updated this week
- Develop custom oligo design pipelines.☆28Apr 23, 2026Updated last week
- Providing top-performing algorithms from the Brain Tumor Segmentation (BraTS) challenges.☆67Mar 16, 2026Updated last month
- Explainability for Random Forest Models.☆33Apr 22, 2026Updated last week
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- blob loss example implementation☆37Aug 3, 2024Updated last year
- BrainLes tutotrials☆11Jul 25, 2025Updated 9 months ago
- Propulate is an asynchronous population-based optimization algorithm and software package for global optimization and hyperparameter sear…☆46Updated this week
- RadTract: enhanced tractometry with radiomics-based imaging biomarkers for improved predictive modelling.☆15Apr 2, 2026Updated last month
- Web Interface for Wind Speed Prediction☆20Apr 17, 2023Updated 3 years ago
- panoptica -- instance-wise evaluation of 3D semantic and instance segmentation maps☆29Apr 22, 2026Updated last week
- The purpose of this project is to be able to automatically and efficiently segment and classify high-grade and low-grade gliomas.☆16Feb 27, 2019Updated 7 years ago
- Automated processing tool for MRI in neuro-oncology (brain tumor segmentation, volumetric tumor response assessment) provided as Containe…☆11Aug 8, 2022Updated 3 years ago
- A flexible template, as a quick setup for deep learning projects in pytorch-lightning☆48Oct 26, 2023Updated 2 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Codebase for Lung PET/CT Survival Analysis☆13Mar 16, 2022Updated 4 years ago
- Dockerfile templates commonly used in BIDS Apps☆11Mar 16, 2026Updated last month
- Algorithm submission template for the TopCoW 2024 challenge on grand-challenge☆11Feb 9, 2025Updated last year
- MICCAI Ischemic Stroke LEsion Segmentation 2022 Top 3 Major Voting Ensemble☆26Feb 3, 2026Updated 3 months ago
- Automated deep-learning based brain tumor segmentation on MRI☆39Aug 24, 2022Updated 3 years ago
- This is a complete guide on how to do Pyradiomics based feature extraction and then, build a model to calculate the grade of glioma.☆28May 9, 2020Updated 5 years ago
- MRI brain extraction tool☆415Dec 18, 2024Updated last year
- AI-based molecular classification of diffuse gliomas using rapid, label-free optical imaging☆35Aug 24, 2022Updated 3 years ago
- Package to compute the evaluation metrics for MICCAI TopCoW2024 challenge☆16Sep 24, 2024Updated last year
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- This repo includes Glioma Segmentation with Mask R-CNN and U-Net.☆71Jan 8, 2020Updated 6 years ago
- Solver for simulating tumor growth and mass effect in patient brain anatomy☆28Jan 7, 2025Updated last year
- A python package for semi-structured deep distributional regression☆22Dec 9, 2022Updated 3 years ago
- Step by step instructions for body/thorax registration☆15Jul 31, 2020Updated 5 years ago
- Python script to obtain dynamic functional connectivity metrics, after using a sliding window approach, statistical analyses to test for …☆12Sep 10, 2024Updated last year
- A generalizable application framework for segmentation, regression, and classification using PyTorch☆192Aug 16, 2025Updated 8 months ago
- Kurtlab's code for BraTS 2023 submission☆13Apr 29, 2024Updated 2 years ago
- This repository contains code used to prepare the LUMIERE Glioblastoma dataset.☆37Feb 14, 2024Updated 2 years ago
- dHCP structural pipeline☆16Jul 13, 2021Updated 4 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Perun is a Python package that measures the energy consumption of your applications.☆91Apr 27, 2026Updated last week
- Dipy pipeline for reconstruction and tracking of tractography from Human Connectome Project dataset☆11Nov 18, 2015Updated 10 years ago
- Resurces for MRI images processing and deep learning in 3D☆151Feb 27, 2026Updated 2 months ago