HelmholtzAI-Consultants-Munich / fg-clustering
Explainability for Random Forest Models.
☆26Updated this week
Related projects ⓘ
Alternatives and complementary repositories for fg-clustering
- A flexible template, as a quick setup for deep learning projects in pytorch-lightning☆44Updated last year
- Develop custom oligo design pipelines.☆13Updated 3 weeks ago
- Self-explanatory tutorials for different model-agnostic and model-specific XAI methods☆47Updated last month
- scivision: a framework for scientific image analysis☆94Updated this week
- Propulate is an asynchronous population-based optimization algorithm and software package for global optimization and hyperparameter sear…☆32Updated this week
- Zenodo_get: Downloader for Zenodo records☆136Updated 5 months ago
- Gamified image segmentation quality estimation☆17Updated 2 years ago
- scalable multiscale image pyramids in python☆26Updated 3 months ago
- Paxplot is a Python visualization library for parallel coordinate plots based on matplotlib.☆10Updated 2 years ago
- A multi-dimensional spatial image data structure for scientific Python.☆37Updated 4 months ago
- Web Interface for Wind Speed Prediction☆18Updated last year
- Generate a multiscale, chunked, multi-dimensional spatial image data structure that can serialized to OME-NGFF.☆38Updated this week
- Self-Supervised Vision Transformers for multiplexed imaging datasets☆45Updated 4 months ago
- Interface for using cupy in xarray, providing convenience accessors.☆68Updated last month
- Static plotting for spatialdata☆36Updated this week
- Analysis tools for SLEAP-based plant root phenotyping.☆10Updated 3 weeks ago
- Next-generation file format (NGFF) specifications for storing bioimaging data in the cloud.☆118Updated this week
- Zoish is a Python package that streamlines machine learning by leveraging SHAP values for feature selection and interpretability, making …☆11Updated 9 months ago
- A tiny Python library for writing multi-channel TIFF stacks.☆28Updated 3 weeks ago
- Explainable AI model of cell behavior☆20Updated last year
- Image registration (alignment) software for large microscopy images☆21Updated last year
- Track and lineage visualization with btrack and Napari☆45Updated 3 weeks ago
- ☆19Updated last year
- A Python package for single-cell spatial image analysis.☆18Updated last year
- A minimal Zarr image viewer based on Viv.☆125Updated 3 weeks ago
- SplineDist: Automated Cell Segmentation with Spline Curves☆65Updated last month
- Python image segmentation plugin☆32Updated 3 years ago
- 🎀 Awesome Zarr resources☆79Updated 5 months ago
- Modular, object-based analysis for ImageJ/Fiji☆11Updated last week
- Python API and Jupyter widget for Vitessce☆40Updated this week