Biomedical-Imaging-Group / OrientationJLinks
ImageJ's plugin for directional analysis in images: color-coded analysis, distribution of orientation, vector field, keypoint detection
☆30Updated last year
Alternatives and similar repositories for OrientationJ
Users that are interested in OrientationJ are comparing it to the libraries listed below
Sorting:
- Connecting Java/ImgLib2 + Python/NumPy☆30Updated 5 months ago
- The python-microscopy environment - an open-source package for light microscopy☆93Updated last month
- Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.☆34Updated last year
- Easily read and write ome-tiff images in python☆28Updated last year
- Various parts made for fluorescence microscopy + optics work☆16Updated 6 years ago
- PSFj - Know your microscope fluorescence☆23Updated 5 years ago
- python bindings to the ClearVolume project that enables serving numpy data from within python to the renderer.☆15Updated 8 years ago
- Online documentation and reference for CLIJ☆28Updated 4 years ago
- Repo for the CZI Imaging Team's napari plugin Alfa Cohort collaboration☆11Updated 4 years ago
- a free, open-source web app for annotating, training, and evaluating image understanding algorithms☆25Updated 4 years ago
- ☆22Updated 2 years ago
- Process images using SimpleITK in napari☆23Updated 7 months ago
- Create movies from series of key-frames in napari.☆38Updated 4 years ago
- Python tools for ImageJ☆13Updated 4 years ago
- GPU Deconvolution Library with C and Matlab API for nVidia GPUs☆21Updated 6 years ago
- ☆20Updated 7 months ago
- Discover, install, and share napari plugins☆54Updated last week
- Create 3D/4D animations using a natural language-based syntax☆61Updated 6 months ago
- A python script editor plugin for napari☆11Updated 2 years ago
- General-purpouse camera capture plugin for data streaming to napari☆26Updated last year
- Detect morphological motifs, such as blebs, filopodia, and lamellipodia, from 3D images of surfaces, particularly images of cell surfaces…☆30Updated 8 months ago
- Fiji macro for cutting confocal stacks at various depths relative to surface signal☆10Updated 5 years ago
- A Beginner's guide to microscopy, from sample prep to acquisition, image analysis, and data interpretation☆29Updated last month
- Simple, fast-loading, n-dimensional array viewer with minimal dependencies.☆87Updated this week
- Import Trackmate XML files in Python as Pandas dataframe☆10Updated 9 months ago
- website for the napari image viewer☆47Updated last week
- A napari plugin for making animations☆89Updated 2 weeks ago
- A BaSiC Tool for Background and Shading Correction of Optical Microscopy Images☆64Updated 9 months ago
- Speed up coding/extending image analysis in Python.☆35Updated last week
- Kaibu -- a progressive web app for visualizing and annotating multi-dimensional images.☆35Updated 8 months ago