Python module for the calculation of shape complementarity
☆14Apr 4, 2026Updated 7 months ago
Alternatives and similar repositories for SCASA
Users that are interested in SCASA are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- An open-source Rust implementation of Shape Complementarity (SC)☆19Oct 2, 2025Updated last year
- ☆33Apr 30, 2026Updated 6 months ago
- Associated code/pipeline for the publication "AI-assisted protein design to rapidly convert antibody sequences to intrabodies targeting d…☆18Feb 18, 2025Updated last year
- Metadiffusion implemented in Boltz-2☆25Feb 23, 2026Updated 8 months ago
- Open-source, commercially permissive implementation of the Germinal antibody design pipeline☆21Updated this week
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Utility scripts to generate and evaluate parametrically guided beta barrel protein backbone structures.☆13Nov 14, 2025Updated 11 months ago
- High-performance SASA (Solvent Accessible Surface Area) calculation in Zig with Python bindings☆13Nov 3, 2026Updated last week
- Integrative protein sequence design with evolutionary multiobjective optimization.☆13Jul 16, 2024Updated 2 years ago
- JAX translation of BoltzGen☆12Nov 11, 2025Updated last year
- TiDE-Ab is a generative framework for the de novo design of therapeutic antibodies targeting specific epitopes.☆13Aug 31, 2026Updated 2 months ago
- GPU-accelerated (CUDA) contact molecular surface (CMS) and Lawrence & Colman shape complementarity (SC) for protein design☆32Sep 26, 2026Updated last month
- Python based Graphical User Interface for generating input files for and running molecular dynamic simulation.☆10Aug 27, 2024Updated 2 years ago
- LIVIA (Local Interaction VIsualization and Analysis) — Analyze and visualize protein interaction interfaces from structure predictions. B…☆28Updated this week
- Coyote-Maestas Final Version☆13Nov 5, 2026Updated last week
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Protein Origami via Genetic Fusions☆19Sep 19, 2022Updated 4 years ago
- Residue Interaction Network ResidUe Selector☆16Jul 21, 2026Updated 3 months ago
- Bayesian Optimization for protein design and mining☆28Jul 2, 2026Updated 4 months ago
- Rank binders by structure modeling☆11Apr 10, 2026Updated 7 months ago
- prepare AMBER files for MD simulations from a pdb file☆13Nov 6, 2026Updated last week
- Versatile human antibody sequence design☆22Apr 12, 2026Updated 7 months ago
- ☆46Jan 10, 2024Updated 2 years ago
- The official repository for TherML - a machine learning approach to predict scFv and antibody thermostability☆16Sep 8, 2023Updated 3 years ago
- Building more accurate protein structures from backbone torsion angles☆16Mar 21, 2025Updated last year
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Pharmacophore Elucidation with Convolutional Neural Networks and Reinforcement Learning☆17Apr 7, 2025Updated last year
- Antibody-Specific Epitope Mapping☆19Sep 10, 2025Updated last year
- ☆15Apr 17, 2025Updated last year
- Repository containing pipelines developed for the SNAC-DB (Structural NANOBODY® VHH and Antibody Complex Database). SNAC-DB is ML-ready c…☆38Jun 8, 2026Updated 5 months ago
- Tools to explore Minimum Decycling Sets (MDSs) of the de Bruijn graph☆12Sep 11, 2025Updated last year
- ☆13Mar 4, 2026Updated 8 months ago
- Deep generative modeling of protein structural ensembles☆41Oct 26, 2026Updated 2 weeks ago
- symdesign source☆11Jul 4, 2024Updated 2 years ago
- Geometric Algebra Flow Matching (GAFL) for Protein Backbone Generation☆20May 5, 2026Updated 6 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Protein-peptide docking with ESMFold language model☆16May 30, 2026Updated 5 months ago
- Official implementation of "Rigidity-Aware Geometric Pretraining for Protein Design and Conformational Ensembles" (ICLR 2026)☆20Mar 16, 2026Updated 7 months ago
- Repo for the publication titled: "Key Interaction Networks: Identifying Evolutionarily Conserved Non-Covalent Interaction Networks Across…☆18Nov 14, 2023Updated 2 years ago
- This script makes a cyclic peptide or cyclic nucleotide topology file for GROMACS out of (specially prepared) linear molecule topology fi…☆14Nov 24, 2020Updated 5 years ago
- protein docking stuff☆59Apr 2, 2026Updated 7 months ago
- TEINet: a deep learning framework for prediction of TCR-epitope binding specificity☆16Jun 30, 2023Updated 3 years ago
- ☆16Aug 22, 2025Updated last year
Are these results useful?