spatially aware scalable and accurate tool for spot deconvolution and clustering in spatial transcriptomics
☆14Aug 12, 2024Updated last year
Alternatives and similar repositories for SpatialPrompt
Users that are interested in SpatialPrompt are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Merge fastq files split over lanes☆20Feb 13, 2018Updated 8 years ago
- domain adaptation of spatial and single-cell transcriptome☆28Sep 21, 2024Updated last year
- Developing multi platform gesture detector application by applying concepts learnt in Embedded Systems course on peripheral devices.☆21Dec 8, 2023Updated 2 years ago
- Bioinformatics workflow that identifies mutational overlaps using data from the 1000 genomes project☆15Jul 30, 2024Updated last year
- Find lines across files by regex and edit them all at once with your $EDITOR☆67Updated this week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Supervised cell type identification for scATAC-seq data☆14Aug 23, 2023Updated 2 years ago
- Markdown转小红书卡片☆10Apr 10, 2025Updated last year
- ☆12Aug 8, 2024Updated last year
- material related to the genetech courses☆10Sep 11, 2023Updated 2 years ago
- CORNAS is a fast method for reliable DEG calls in unreplicated conditions.☆13Jul 14, 2019Updated 6 years ago
- ☆12Jun 11, 2023Updated 2 years ago
- ☆10Dec 14, 2016Updated 9 years ago
- Automated Rice Variant calling workflow for HPC, Cloud and Desktop systems.☆13May 11, 2024Updated last year
- AncestralClust☆11Jul 9, 2025Updated 9 months ago
- Serverless GPU API endpoints on Runpod - Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Multi-omics profiling of peripheral immune system response to SARS-CoV-2 infection☆41Dec 21, 2021Updated 4 years ago
- Bumpers for Choc keycaps☆11Aug 17, 2024Updated last year
- ☆11Feb 11, 2021Updated 5 years ago
- Detecting cancer subtypes with machine learning.☆10Feb 5, 2020Updated 6 years ago
- This repository implements the winning solution for the single cell perturbation problems☆16Dec 22, 2023Updated 2 years ago
- Single Cell RNA PolyA Site Discovery☆11Jan 28, 2026Updated 2 months ago
- Gene orthologs for model organisms in a tidy data format☆14Sep 29, 2022Updated 3 years ago
- The easy way to save snapshots for apps☆68Apr 9, 2026Updated last week
- ☆13Feb 12, 2026Updated 2 months ago
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆12Jul 15, 2022Updated 3 years ago
- EPIDEMIC is an easy-to-run Matlab/Octave educational toolkit for epidemiological analysis.☆17Apr 4, 2025Updated last year
- Code for RNA-seq gene coexpression analysis☆10Dec 23, 2021Updated 4 years ago
- Scripts for going from raw .fastq files to processed and quality-checked .bam files for downstream analysis☆14Nov 23, 2021Updated 4 years ago
- A quick workflow to get researchers started with the bioinformatic pipeline used in the Environmental Metagenomics program.☆13Feb 17, 2025Updated last year
- Population Genomics in R workshop☆12Mar 24, 2024Updated 2 years ago
- ☆12Jan 9, 2023Updated 3 years ago
- Shadow objects for AnnData and MuData (experimental)☆12Feb 28, 2025Updated last year
- My English blog built with Hugo☆11Feb 14, 2026Updated 2 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- See what's on your ports, then act on it. Diagnostic-first port viewer for Linux, MacOS and Windows.☆57Apr 6, 2026Updated last week
- Code for the MARSY model with sample input and response. I included figures to show the architecture and format of input samples.☆14Dec 22, 2022Updated 3 years ago
- Code required to reproduce the analysis made in Kiviaho et al. 2024☆12Nov 29, 2024Updated last year
- spSeudoMap: cell type mapping of spatial transcriptomics using unmatched single-cell RNA-seq data☆13Sep 29, 2024Updated last year
- an R package collection for topological data analysis☆16Feb 25, 2026Updated last month
- ☆15Sep 24, 2024Updated last year
- detecting spatial patterns of allele-specific expression☆11May 22, 2024Updated last year